CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig1079.frz3.fgene1
(
Meloidogyne hapla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MhA1_Contig1079.frz3.fgene1
T154952_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig1079.frz3.fgene1
C2H2 ZF
48
70
FICEICNKAFRFRSNLAEHRSVH
MhA1_Contig1079.frz3.fgene1
C2H2 ZF
76
99
FVCKFCGKSSRLKGNLTKHILKHH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne hapla
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_00938
Ancylostoma duodenale
ANCDUO_00938
N
0.821
Bm7577
Brugia malayi
Bm7577
I
0.827
CGOC_0000024901
Cylicostephanus goldi
CGOC_0000024901
N
0.821
D917_09267
Trichinella nativa
D917_09267
N
0.792
D918_09500
Trichuris suis
D918_09500
N
0.822
EFV59452
Trichinella spiralis
EFV59452
N
0.792
EFV59481
Trichinella spiralis
EFV59481
N
0.822
genemark-nMf.1.1.scaf21811-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf21811-processed-gene-0.1
N
0.827
HPBE_0001786001
Heligmosomoides bakeri
HPBE_0001786001
N
0.821
Minc14444
Meloidogyne incognita
Minc14444
N
0.827
PTRK_0001387500
Parastrongyloides trichosuri
PTRK_0001387500
N
0.792
SPAL_0000861900
Strongyloides papillosus
SPAL_0000861900
N
0.792
SSTP_0000891500
Strongyloides stercoralis
SSTP_0000891500
N
0.792
SVE_1047000
Strongyloides venezuelensis
SVE_1047000
N
0.792
TMUE_s0005013100
Trichuris muris
TMUE_s0005013100
N
0.822
TTRE_0000192401
Trichuris trichiura
TTRE_0000192401
N
0.822