CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
D917_09267
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_09267
T152904_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_09267
C2H2 ZF
166
188
FVCEICGKAFRFRSNLAEHRSVH
D917_09267
C2H2 ZF
194
217
FVCLICGKSSRLKGNLTKHILKHH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFV59452
Trichinella spiralis
EFV59452
N
0.827
SPAL_0000861900
Strongyloides papillosus
SPAL_0000861900
N
0.792
PTRK_0001387500
Parastrongyloides trichosuri
PTRK_0001387500
N
0.792
SSTP_0000891500
Strongyloides stercoralis
SSTP_0000891500
N
0.792
TMUE_s0005013100
Trichuris muris
TMUE_s0005013100
N
0.792
TTRE_0000192401
Trichuris trichiura
TTRE_0000192401
N
0.792
MhA1_Contig1079.frz3.fgene1
Meloidogyne hapla
MhA1_Contig1079.frz3.fgene1
N
0.792
SVE_1047000
Strongyloides venezuelensis
SVE_1047000
N
0.792
genemark-nMf.1.1.scaf21811-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf21811-processed-gene-0.1
N
0.792
Minc14444
Meloidogyne incognita
Minc14444
N
0.792
EFV59481
Trichinella spiralis
EFV59481
N
0.792
ANCDUO_00938
Ancylostoma duodenale
ANCDUO_00938
N
0.792
CGOC_0000024901
Cylicostephanus goldi
CGOC_0000024901
N
0.792
Bm7577
Brugia malayi
Bm7577
I
0.792
D918_09500
Trichuris suis
D918_09500
N
0.792
HPBE_0001786001
Heligmosomoides bakeri
HPBE_0001786001
N
0.792