CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMTD_0001402601
(
Schistosoma mattheei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMTD_0001402601
T156377_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0001402601-mRNA-1
C2H2 ZF
395
417
YFCHLCNKVYYSMSALKMHVRTH
SMTD_0001402601-mRNA-1
C2H2 ZF
421
443
CKCNLCGKAFSRMWLLNGHLRTH
SMTD_0001402601-mRNA-1
C2H2 ZF
449
471
FACMICTRAFADRSNLRAHMQTH
SMTD_0001402601-mRNA-1
C2H2 ZF
477
498
YQCLHCDRTFSRMGLLTKHQTT
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma mattheei
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_06784
Schistosoma haematobium
A_06784
N
0.815
csin108446
Clonorchis sinensis
csin108446
N
0.779
D915_03988
Fasciola hepatica
D915_03988
N
0.782
PXEA_0001482701
Protopolystoma xenopodis
PXEA_0001482701
N
0.781
SCUD_0002117401
Schistosoma curassoni
SCUD_0002117401
N
0.827
Sjc_0048660
Schistosoma japonicum
Sjc_0048660
N
0.822
Smp_068240
Schistosoma mansoni
Smp_068240
N
0.827
T265_03041
Opisthorchis viverrini
T265_03041
N
0.779
TRE_0001278101
Trichobilharzia regenti
TRE_0001278101
N
0.819