SPAL_0000884500 (Strongyloides papillosus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SPAL_0000884500 T156516_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.756 0.798
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.756 0.798
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.756 0.798
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPAL_0000884500.1 C2H2 ZF 638 660
SPAL_0000884500.1 C2H2 ZF 666 688
SPAL_0000884500.1 C2H2 ZF 694 716
SPAL_0000884500.1 C2H2 ZF 722 744
SPAL_0000884500.1 C2H2 ZF 750 771

Links

Other C2H2 ZF family TFs
Other Strongyloides papillosus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_90116 Fragilariopsis cylindrus estExt_fgenesh2_pg.C_90116 N
Phatr3_J35419 Phaeodactylum tricornutum Phatr3_J35419 N
Phatr3_J45666 Phaeodactylum tricornutum Phatr3_J45666 N
Thaps1785 Thalassiosira pseudonana Thaps1785 N
Thaps6765 Thalassiosira pseudonana Thaps6765 N
Thaps6935 Thalassiosira pseudonana Thaps6935 I
Thaps9086 Thalassiosira pseudonana Thaps9086 N
Thapsdraft1071 Thalassiosira pseudonana Thapsdraft1071 N