CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0411200
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_0411200
T157404_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0411200.1
C2H2 ZF
166
188
FICRTCGKKFTLQRLLNRHVKCH
SVE_0411200.1
C2H2 ZF
194
216
YLCTFCGKGFSDTFDLKRHTRTH
SVE_0411200.1
C2H2 ZF
222
245
YKCHHCDKSFTQRCSLESHLRKVH
SVE_0411200.1
C2H2 ZF
261
284
FVCEDCGYTSPNYDEYISHLRVTH
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALUE_0000733001
Ascaris lumbricoides
ALUE_0000733001
N
0.774
ASU_07904
Ascaris suum
ASU_07904
N
0.774
BXY_1671600
Bursaphelenchus xylophilus
BXY_1671600
N
0.779
PTRK_0001697400
Parastrongyloides trichosuri
PTRK_0001697400
N
0.819
SPAL_0001675900
Strongyloides papillosus
SPAL_0001675900
N
0.827
SSTP_0000189100
Strongyloides stercoralis
SSTP_0000189100
N
0.824