CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ALUE_0000733001
(
Ascaris lumbricoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ALUE_0000733001
T151944_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000733001-mRNA-1
C2H2 ZF
120
142
LTCRICGKKFALQRLLNRHAKCH
ALUE_0000733001-mRNA-1
C2H2 ZF
148
170
YLCTFCGKGFNDTFDLKRHTRTH
ALUE_0000733001-mRNA-1
C2H2 ZF
176
199
YKCDQCEKSFTQRCSLESHLRKVH
ALUE_0000733001-mRNA-1
C2H2 ZF
215
238
FVCEDCGFTATVFDEYISHLSLSH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris lumbricoides
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_07904
Ascaris suum
ASU_07904
N
0.827
GPUH_0002051601
Gongylonema pulchrum
GPUH_0002051601
N
0.778
GPUH_0002053201
Gongylonema pulchrum
GPUH_0002053201
N
0.778
PTRK_0001697400
Parastrongyloides trichosuri
PTRK_0001697400
N
0.777
TCLT_0000866601
Thelazia callipaeda
TCLT_0000866601
N
0.777
BXY_1671600
Bursaphelenchus xylophilus
BXY_1671600
N
0.774
SPAL_0001675900
Strongyloides papillosus
SPAL_0001675900
N
0.774
SSTP_0000189100
Strongyloides stercoralis
SSTP_0000189100
N
0.774
SVE_0411200
Strongyloides venezuelensis
SVE_0411200
N
0.774