CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_1868800
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_1868800
T157443_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_1868800.2
C2H2 ZF
415
437
YICEYCNKDFRRPDILSRHLRRH
SVE_1868800.2
C2H2 ZF
443
465
FGCNDCGRFFSRSDHLRTHRRTH
SVE_1868800.2
C2H2 ZF
471
494
YKCPICNYAARRRDVLSRHLGARH
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPLIN_000062600
Globodera pallida
GPLIN_000062600
N
0.769
GPLIN_001154300
Globodera pallida
GPLIN_001154300
N
0.769
L596_g11489
Steinernema carpocapsae
L596_g11489
I
0.771
L893_g30492
Steinernema glaseri
L893_g30492
I
0.767
PTRK_0000085000
Parastrongyloides trichosuri
PTRK_0000085000
N
0.827
SSTP_0000460600
Strongyloides stercoralis
SSTP_0000460600
N
0.827