L893_g30492 (Steinernema glaseri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L893_g30492 T154684_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.764 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g30492.t1 C2H2 ZF 316 338
L893_g30492.t1 C2H2 ZF 344 366
L893_g30492.t1 C2H2 ZF 372 395
L893_g30492.t2 C2H2 ZF 270 292
L893_g30492.t2 C2H2 ZF 298 320
L893_g30492.t2 C2H2 ZF 326 349
L893_g30492.t3 C2H2 ZF 360 382
L893_g30492.t3 C2H2 ZF 388 410
L893_g30492.t3 C2H2 ZF 416 439

Links

Other C2H2 ZF family TFs
Other Steinernema glaseri TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g11489 Steinernema carpocapsae L596_g11489 I 0.820
L889_g28325 Steinernema feltiae L889_g28325 I 0.804
L898_g6014 Steinernema monticolum L898_g6014 I 0.801
BXY_0680200 Bursaphelenchus xylophilus BXY_0680200 I 0.780
GPLIN_000062600 Globodera pallida GPLIN_000062600 N 0.770
GPLIN_001154300 Globodera pallida GPLIN_001154300 N 0.770
PTRK_0000085000 Parastrongyloides trichosuri PTRK_0000085000 N 0.767
SSTP_0000460600 Strongyloides stercoralis SSTP_0000460600 N 0.767
SVE_1868800 Strongyloides venezuelensis SVE_1868800 N 0.767
CBG12610 Caenorhabditis briggsae CBG12610 I 0.764
CBN10213 Caenorhabditis brenneri CBN10213 I 0.764
CBN19187 Caenorhabditis brenneri CBN19187 I 0.764
CRE07023 Caenorhabditis remanei CRE07023 I 0.764
klu-2 Caenorhabditis elegans WBGene00022592 D 0.764
TCNE_0000622401 Toxocara canis TCNE_0000622401 I 0.764
CJA33261 Caenorhabditis japonica CJA33261 I 0.761
ANCCAN_17930 Ancylostoma caninum ANCCAN_17930 I 0.757
ANCCEY_13832 Ancylostoma ceylanicum ANCCEY_13832 I 0.757
HCOI01254700 Haemonchus contortus HCOI01254700 I 0.757
HPLM_0001133101 Haemonchus placei HPLM_0001133101 I 0.757
TELCIR_01018 Teladorsagia circumcincta TELCIR_01018 I 0.757