CBN10213 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN10213 T083009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN10213 C2H2 ZF 243 265
CBN10213 C2H2 ZF 271 293
CBN10213 C2H2 ZF 299 322

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG12610 Caenorhabditis briggsae CBG12610 I 0.827
CBN19187 Caenorhabditis brenneri CBN19187 I 0.827
CRE07023 Caenorhabditis remanei CRE07023 I 0.827
klu-2 Caenorhabditis elegans WBGene00022592 D 0.827
CJA33261 Caenorhabditis japonica CJA33261 I 0.824
ANCCAN_17930 Ancylostoma caninum ANCCAN_17930 I 0.777
ANCCEY_13832 Ancylostoma ceylanicum ANCCEY_13832 I 0.777
HCOI01254700 Haemonchus contortus HCOI01254700 I 0.777
HPLM_0001133101 Haemonchus placei HPLM_0001133101 I 0.777
TELCIR_01018 Teladorsagia circumcincta TELCIR_01018 I 0.777
L596_g11489 Steinernema carpocapsae L596_g11489 I 0.764
L889_g28325 Steinernema feltiae L889_g28325 I 0.764
L893_g30492 Steinernema glaseri L893_g30492 I 0.764
TCNE_0000622401 Toxocara canis TCNE_0000622401 I 0.764
ASU_05504 Ascaris suum ASU_05504 I 0.763
BXY_0680200 Bursaphelenchus xylophilus BXY_0680200 I 0.761
L898_g6014 Steinernema monticolum L898_g6014 I 0.761