HCOI01254700 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI01254700 T153842_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.777 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01254700.t1 C2H2 ZF 318 340
HCOI01254700.t1 C2H2 ZF 346 368
HCOI01254700.t1 C2H2 ZF 374 397

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPLM_0001133101 Haemonchus placei HPLM_0001133101 I 0.827
ANCCAN_17930 Ancylostoma caninum ANCCAN_17930 I 0.824
ANCCEY_13832 Ancylostoma ceylanicum ANCCEY_13832 I 0.824
TELCIR_01018 Teladorsagia circumcincta TELCIR_01018 I 0.823
CJA33261 Caenorhabditis japonica CJA33261 I 0.780
CBG12610 Caenorhabditis briggsae CBG12610 I 0.777
CBN10213 Caenorhabditis brenneri CBN10213 I 0.777
CBN19187 Caenorhabditis brenneri CBN19187 I 0.777
CRE07023 Caenorhabditis remanei CRE07023 I 0.777
klu-2 Caenorhabditis elegans WBGene00022592 D 0.777
RSKR_0000033200 Rhabditophanes kr3021 RSKR_0000033200 N 0.777
TCNE_0000622401 Toxocara canis TCNE_0000622401 I 0.777
L889_g28325 Steinernema feltiae L889_g28325 I 0.773
PPA04971 Pristionchus pacificus PPA04971 N 0.770
GPLIN_000062600 Globodera pallida GPLIN_000062600 N 0.770
GPLIN_001154300 Globodera pallida GPLIN_001154300 N 0.770
scaffold607-EXSNAP2012.9 Pristionchus exspectatus scaffold607-EXSNAP2012.9 N 0.770
ASU_05504 Ascaris suum ASU_05504 I 0.760
BXY_0680200 Bursaphelenchus xylophilus BXY_0680200 I 0.760
L596_g11489 Steinernema carpocapsae L596_g11489 I 0.760
L893_g30492 Steinernema glaseri L893_g30492 I 0.757