CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000400601
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000400601
T157969_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000400601-mRNA-1
C2H2 ZF
498
521
FPCNQCKEEFPSLHTLEQHTLGQH
TRE_0000400601-mRNA-1
C2H2 ZF
524
546
YRCHICRAQFTQRSNLQRHALKH
TRE_0000400601-mRNA-1
C2H2 ZF
552
575
FECRVCSKAYYRKDHLMRHMEMGH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG012013.1
Alligator sinensis
Alligator_sinensis_CCG012013.1
N
0.000
BAZ2B
Bos taurus
ENSBTAG00000020654
N
0.000
BAZ2B
Gasterosteus aculeatus
ENSGACG00000005734
N
0.000
BAZ2B
Meleagris gallopavo
ENSMGAG00000012953
N
0.000
baz2b
Xenopus tropicalis
XB-GENE-964622
N
0.000
baz2ba
Oryzias latipes
ENSORLG00000004260
N
0.000
baz2ba
Takifugu rubripes
ENSTRUG00000017174
N
0.000
ENSAPLG00000015688
Anas platyrhynchos
ENSAPLG00000015688
N
0.000
ENSGACG00000015193
Gasterosteus aculeatus
ENSGACG00000015193
N
0.000
ENSLOCG00000006024
Lepisosteus oculatus
ENSLOCG00000006024
N
0.000
ENSONIG00000003272
Oreochromis niloticus
ENSONIG00000003272
N
0.000
ENSONIG00000008939
Oreochromis niloticus
ENSONIG00000008939
N
0.000
ENSPFOG00000015860
Poecilia formosa
ENSPFOG00000015860
N
0.000
Ogr09813
Ophisaurus gracilis
Ogr09813
N
0.000