CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG012013.1
(
Alligator sinensis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Alligator_sinensis_CCG012013.1
T261223_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG012013.1
MBD
585
637
VTDERELRIPLEYGWQRETRIRSFGGRLQGEVAYYAPCGKKLRQYPEVIKGMQ
Links
Other
MBD
family TFs
Other
Alligator sinensis
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAZ2B
Homo sapiens
ENSG00000123636
N
0.981
BAZ2B
Gorilla gorilla
ENSGGOG00000016720
N
0.981
BAZ2B
Loxodonta africana
ENSLAFG00000014380
N
0.981
BAZ2B
Macaca mulatta
ENSMMUG00000006182
N
0.981
BAZ2B
Otolemur garnettii
ENSOGAG00000012349
N
0.981
BAZ2B
Sus scrofa
ENSSSCG00000015882
N
0.981
ENSSTOG00000009772
Ictidomys tridecemlineatus
ENSSTOG00000009772
N
0.981
BAZ2B
Bos taurus
ENSBTAG00000020654
N
0.962
Ogr09813
Ophisaurus gracilis
Ogr09813
N
0.962
ENSLOCG00000006024
Lepisosteus oculatus
ENSLOCG00000006024
N
0.943
BAZ2B
Canis familiaris
ENSCAFG00000009433
N
0.925
BAZ2B
Callithrix jacchus
ENSCJAG00000015052
N
0.925
BAZ2B
Cavia porcellus
ENSCPOG00000015233
N
0.925
ENSCSAG00000015843
Chlorocebus sabaeus
ENSCSAG00000015843
N
0.925
BAZ2B
Dasypus novemcinctus
ENSDNOG00000006145
N
0.925
BAZ2B
Felis catus
ENSFCAG00000007573
N
0.925
BAZ2B
Meleagris gallopavo
ENSMGAG00000012953
N
0.925
BAZ2B
Microcebus murinus
ENSMICG00000013967
N
0.925
BAZ2B
Myotis lucifugus
ENSMLUG00000001182
N
0.925
BAZ2B
Monodelphis domestica
ENSMODG00000005005
N
0.925
ENSMPUG00000000490
Mustela putorius furo
ENSMPUG00000000490
N
0.925
ENSNLEG00000001067
Nomascus leucogenys
ENSNLEG00000001067
N
0.925
BAZ2B
Ornithorhynchus anatinus
ENSOANG00000006146
N
0.925
BAZ2B
Oryctolagus cuniculus
ENSOCUG00000015150
N
0.925
ENSPANG00000009095
Papio anubis
ENSPANG00000009095
N
0.925
ENSPPYG00000012872
Pongo abelii
ENSPPYG00000012872
N
0.925
BAZ2B
Pan troglodytes
ENSPTRG00000012563
N
0.925
BAZ2B
Pteropus vampyrus
ENSPVAG00000013042
N
0.925
BAZ2B
Tupaia belangeri
ENSTBEG00000016991
N
0.925
BAZ2B
Tursiops truncatus
ENSTTRG00000001866
N
0.925
ENSP00000376534
Macaca fascicularis
ENSP00000376534
N
0.925
ENSAMEG00000010194
Ailuropoda melanoleuca
ENSAMEG00000010194
N
0.906
BAZ2B
Equus caballus
ENSECAG00000012235
N
0.906
BAZ2B
Gallus gallus
ENSGALG00000012579
N
0.906
ENSOARG00000007352
Ovis aries
ENSOARG00000007352
N
0.906
BAZ2B
Sorex araneus
ENSSARG00000004075
N
0.906
Afo_R003860
Aptenodytes forsteri
Afo_R003860
N
0.906
ENSBTAP00000053510-D1
Bos grunniens
ENSBTAP00000053510-D1
N
0.906
Myotis_brandtii_BAZ2B_10035557
Myotis brandtii
Myotis_brandtii_BAZ2B_10035557
N
0.906
Pvit_15950
Pogona vitticeps
Pvit_15950
N
0.906
BAZ2B
Anolis carolinensis
ENSACAG00000010585
N
0.887
BAZ2B
Choloepus hoffmanni
ENSCHOG00000007941
N
0.887
ENSAPLG00000015688
Anas platyrhynchos
ENSAPLG00000015688
N
0.868
ENSPSIG00000013064
Pelodiscus sinensis
ENSPSIG00000013064
N
0.868
BAZ2B
Taeniopygia guttata
ENSTGUG00000012233
N
0.868
Gfo_R005657
Geospiza fortis
Gfo_R005657
N
0.868
ENSLACG00000002050
Latimeria chalumnae
ENSLACG00000002050
N
0.849
Aan_R012052
Calypte anna
Aan_R012052
N
0.849
ENSFALG00000003242
Ficedula albicollis
ENSFALG00000003242
N
0.811
BAZ2B
Gasterosteus aculeatus
ENSGACG00000005734
N
0.811
ENSONIG00000008939
Oreochromis niloticus
ENSONIG00000008939
N
0.811
Baz2b
Rattus norvegicus
ENSRNOG00000056984
N
0.811
ENSGACG00000015193
Gasterosteus aculeatus
ENSGACG00000015193
N
0.774
Baz2b
Mus musculus
ENSMUSG00000026987
N
0.774
ENSONIG00000003272
Oreochromis niloticus
ENSONIG00000003272
N
0.774
baz2b
Xenopus tropicalis
XB-GENE-964622
N
0.774
XP_002933311
Xenopus tropicalis
XP_002933311
N
0.774
XP_002933312
Xenopus tropicalis
XP_002933312
N
0.774
baz2ba
Oryzias latipes
ENSORLG00000004260
N
0.755
ENSPFOG00000015860
Poecilia formosa
ENSPFOG00000015860
N
0.755
ENSXMAG00000001723
Xiphophorus maculatus
ENSXMAG00000001723
N
0.755
baz2ba
Takifugu rubripes
ENSTRUG00000017174
N
0.736
ENSAMXG00000009932
Astyanax mexicanus
ENSAMXG00000009932
N
0.717