CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000447301
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000447301
T157971_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000447301-mRNA-1
C2H2 ZF
496
518
YACKLCSKVYSQASALKMHVRTH
TRE_0000447301-mRNA-1
C2H2 ZF
522
544
CRCSHCGKSFSRKWLLKGHERTH
TRE_0000447301-mRNA-1
C2H2 ZF
550
572
YSCNICGRSFADRSNLRAHMQTH
TRE_0000447301-mRNA-1
C2H2 ZF
578
602
YSCAYCPRSFSRMGLLNKHILQCNH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGACG00000007220
Gasterosteus aculeatus
ENSGACG00000007220
N
ENSONIG00000011529
Oreochromis niloticus
ENSONIG00000011529
N