CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000842101
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000842101
T157991_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000842101-mRNA-1
C2H2 ZF
513
535
YQCPHCMKEFPRSANLNRHLRTH
TRE_0000842101-mRNA-1
C2H2 ZF
541
564
YSCEYCQRGFSISSNMQRHIRNIH
TRE_0000842101-mRNA-1
C2H2 ZF
570
592
FVCTICTRAFAQRTNLDRHKRHH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00028
Schistosoma haematobium
A_00028
N
0.762
csin100079
Clonorchis sinensis
csin100079
N
0.800
D915_00838
Fasciola hepatica
D915_00838
N
0.757
ECANG7_10971
Echinococcus canadensis
ECANG7_10971
N
0.783
ECPE_0000538201
Echinostoma caproni
ECPE_0000538201
N
0.761
EmuJ_000551700
Echinococcus multilocularis
EmuJ_000551700
N
0.783
HDID_0001097601
Hymenolepis diminuta
HDID_0001097601
N
0.799
HmN_000362800
Hymenolepis microstoma
HmN_000362800
N
0.783
HNAJ_0001293101
Hymenolepis nana
HNAJ_0001293101
N
0.799
SCUD_0001903101
Schistosoma curassoni
SCUD_0001903101
N
0.789
SMTD_0001434401
Schistosoma mattheei
SMTD_0001434401
N
0.789
SROB_0001000801
Schistosoma rodhaini
SROB_0001000801
N
0.789
SSLN_0001781901
Schistocephalus solidus
SSLN_0001781901
N
0.780
TASK_0000238201
Taenia asiatica
TASK_0000238201
N
0.783
TsM_000735400
Taenia solium
TsM_000735400
N
0.783
TTAC_0000642201
Hydatigera taeniaeformis
TTAC_0000642201
N
0.783