CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0000842101
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0000842101
T157991_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0000842101-mRNA-1
C2H2 ZF
513
535
YQCPHCMKEFPRSANLNRHLRTH
TRE_0000842101-mRNA-1
C2H2 ZF
541
564
YSCEYCQRGFSISSNMQRHIRNIH
TRE_0000842101-mRNA-1
C2H2 ZF
570
592
FVCTICTRAFAQRTNLDRHKRHH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin100079
Clonorchis sinensis
csin100079
N
0.800
HDID_0001097601
Hymenolepis diminuta
HDID_0001097601
N
0.799
HNAJ_0001293101
Hymenolepis nana
HNAJ_0001293101
N
0.799
SCUD_0001903101
Schistosoma curassoni
SCUD_0001903101
N
0.789
SMTD_0001434401
Schistosoma mattheei
SMTD_0001434401
N
0.789
SROB_0001000801
Schistosoma rodhaini
SROB_0001000801
N
0.789
ECANG7_10971
Echinococcus canadensis
ECANG7_10971
N
0.783
EmuJ_000551700
Echinococcus multilocularis
EmuJ_000551700
N
0.783
HmN_000362800
Hymenolepis microstoma
HmN_000362800
N
0.783
TASK_0000238201
Taenia asiatica
TASK_0000238201
N
0.783
TsM_000735400
Taenia solium
TsM_000735400
N
0.783
TTAC_0000642201
Hydatigera taeniaeformis
TTAC_0000642201
N
0.783
SSLN_0001781901
Schistocephalus solidus
SSLN_0001781901
N
0.780
A_00028
Schistosoma haematobium
A_00028
N
0.762
ECPE_0000538201
Echinostoma caproni
ECPE_0000538201
N
0.761
D915_00838
Fasciola hepatica
D915_00838
N
0.757