CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRE_0001399901
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0001399901
T158017_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001399901-mRNA-1
C2H2 ZF
274
298
FVCGMLNCNKRFVRIDELKRHQRTH
TRE_0001399901-mRNA-1
C2H2 ZF
304
326
FVCDICKKGFTRSDHLMTHRRTH
TRE_0001399901-mRNA-1
C2H2 ZF
332
354
YECKLCDRRFARSDERNRHTKTH
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_08011
Schistosoma haematobium
A_08011
N
0.787
csin110935
Clonorchis sinensis
csin110935
N
0.758
ECPE_0000283101
Echinostoma caproni
ECPE_0000283101
N
0.760
SCUD_0000264601
Schistosoma curassoni
SCUD_0000264601
N
0.787
Sjc_0007560
Schistosoma japonicum
Sjc_0007560
N
0.803
Smp_134870
Schistosoma mansoni
Smp_134870
N
0.787
SMRZ_0000176601
Schistosoma margrebowiei
SMRZ_0000176601
N
0.787
SMTD_0000035801
Schistosoma mattheei
SMTD_0000035801
N
0.787
SROB_0000218201
Schistosoma rodhaini
SROB_0000218201
N
0.787
T265_03935
Opisthorchis viverrini
T265_03935
N
0.758