CGI_10022678 (Crassostrea gigas)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01530 (zf-C2HC) IPR002515 CGI_10022678 T158870_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EKC38087 C2HC ZF 211 238

Links

Other C2HC ZF family TFs
Other Crassostrea gigas TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N
BGIOSGA025902 Oryza indica BGIOSGA025902 N
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N
Ca_06943 Cicer arietinum Ca_06943 N
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N
CIGR1 Oryza sativa OS07G0545800 N
Cucsa.053270 Cucumis sativus Cucsa.053270 N
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N
evm.TU.supercontig_3097.1 Carica papaya evm.TU.supercontig_3097.1 N
F775_07373 Aegilops tauschii F775_07373 N
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N
GLYMA06G41500 Glycine max GLYMA06G41500 N
GLYMA12G16750 Glycine max GLYMA12G16750 N
GLYMA12G34420 Glycine max GLYMA12G34420 N
GLYMA13G36120 Glycine max GLYMA13G36120 N
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N
GRMZM5G821439 Zea mays GRMZM5G821439 N
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N
LjSGA_123909.1 Lotus japonicus LjSGA_123909.1 N
Lus10035840.g Linum usitatissimum Lus10035840.g N
Lus10036623.g Linum usitatissimum Lus10036623.g N
MDP0000205622 Malus domestica MDP0000205622 N
mgf007614m Mimulus guttatus mgf007614m N
MLOC_37712 Hordeum vulgare MLOC_37712 N
MTR_2g082090 Medicago truncatula MTR_2g082090 N
OB07G23640 Oryza brachyantha OB07G23640 N
OBART07G17780 Oryza barthii OBART07G17780 N
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N
OLONG_024541 Oryza longistaminata OLONG_024541 N
OMERI07G14660 Oryza meridionalis OMERI07G14660 N
ONIVA07G16090 Oryza nivara ONIVA07G16090 N
OPUNC07G16570 Oryza punctata OPUNC07G16570 N
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N
Pavir.J35699 Panicum virgatum Pavir.J35699 N
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N
PK07026.1 Cannabis sativa PK07026.1 N
Pm029452 Prunus mume Pm029452 N
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N
Sb02g035680 Sorghum bicolor Sb02g035680 N
Si029156m.g Setaria italica Si029156m.g N
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N
TCM_031132 Theobroma cacao TCM_031132 N
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N
TRIUR3_35245 Triticum urartu TRIUR3_35245 N
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N