CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g242817
(
Nematostella vectensis
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
NEMVEDRAFT_v1g242817
T159369_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO41350
C2HC ZF
199
227
GCPTPRCDGKGHVNGRFASHRSVYGCPNA
EDO41350
C2HC ZF
250
277
RCPTSGCDGSGHKSGLFASHRSLYGCPR
EDO41350
C2HC ZF
297
325
RCPTPGCDGTGHRTGLYTSHRSLSGCPIA
EDO41350
C2HC ZF
624
652
GCPTPDCDGTGHVNGRFASHRRLSGCPRA
Links
Other
C2HC ZF
family TFs
Other
Nematostella vectensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGI_10022679
Crassostrea gigas
CGI_10022679
N
0.724
ENSPMAG00000001124
Petromyzon marinus
ENSPMAG00000001124
N
0.722
MYT1L
Pteropus vampyrus
ENSPVAG00000001625
N
0.704
tetur15g00740
Tetranychus urticae
tetur15g00740
N
0.704