Alligator_sinensis_CCG020716.1 (Alligator sinensis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Alligator_sinensis_CCG020716.1 T159422_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG020716.1 C2HC ZF 511 540

Links

Other C2HC ZF family TFs
Other Alligator sinensis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R010877 Calypte anna Aan_R010877 N 0.862
Afo_R009710 Aptenodytes forsteri Afo_R009710 N 0.897
ENSAMXG00000005528 Astyanax mexicanus ENSAMXG00000005528 N 0.759
ENSAPLG00000016290 Anas platyrhynchos ENSAPLG00000016290 N 0.897
ENSFALG00000001349 Ficedula albicollis ENSFALG00000001349 N 0.931
ENSGALG00000001345 Gallus gallus ENSGALG00000001345 N 0.897
ENSGMOG00000015112 Gadus morhua ENSGMOG00000015112 N 0.793
ENSLACG00000008848 Latimeria chalumnae ENSLACG00000008848 N 0.931
ENSLOCG00000004154 Lepisosteus oculatus ENSLOCG00000004154 N 0.793
ENSLOCG00000004175 Lepisosteus oculatus ENSLOCG00000004175 N 0.793
ENSMGAG00000002349 Meleagris gallopavo ENSMGAG00000002349 N 0.897
ENSONIG00000006099 Oreochromis niloticus ENSONIG00000006099 N 0.793
ENSPFOG00000016946 Poecilia formosa ENSPFOG00000016946 N 0.793
ENSPSIG00000008427 Pelodiscus sinensis ENSPSIG00000008427 N 0.966
ENSTGUG00000000758 Taeniopygia guttata ENSTGUG00000000758 N 0.931
ENSXMAG00000013080 Xiphophorus maculatus ENSXMAG00000013080 N 0.793
Gfo_R008942 Geospiza fortis Gfo_R008942 N 0.931
l3mbtl1b Oryzias latipes ENSORLG00000009102 N 0.793
l3mbtl1b Tetraodon nigroviridis ENSTNIG00000018364 N 0.793
l3mbtl1b Takifugu rubripes ENSTRUG00000008264 N 0.793
l3mbtl1b Gasterosteus aculeatus ENSGACG00000009206 N 0.759
l3mbtl1b Danio rerio ENSDARG00000074346 N 0.793
l3mbtl3 Xenopus tropicalis XB-GENE-1219135 N 0.828
l3mbtl3.S Xenopus laevis XB-GENE-1219139 N 0.828
Ogr03652 Ophisaurus gracilis Ogr03652 N 0.931
Pvit_13740 Pogona vitticeps Pvit_13740 N 0.862
Tal_R003526 Tyto alba Tal_R003526 N 0.897