estExt_gwp.C_5980021 (Branchiostoma floridae)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 estExt_gwp.C_5980021 T159489_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp.C_5980021 C2HC ZF 43 71

Links

Other C2HC ZF family TFs
Other Branchiostoma floridae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014528 Ricinus communis 30147.m014528 N 0.000
AMTR_s00009p00241540 Amborella trichopoda AMTR_s00009p00241540 N 0.000
Bo3g103450 Brassica oleracea Bo3g103450 N 0.000
Bostr.0568s0468 Boechera stricta Bostr.0568s0468 N 0.000
Bra038629 Brassica rapa Bra038629 N 0.000
Cagra.0248s0020 Capsella grandiflora Cagra.0248s0020 N 0.000
Carubv10027519m.g Capsella rubella Carubv10027519m.g N 0.000
emb2746 Arabidopsis thaliana AT5G63420 N 0.000
emb2746 Vitis vinifera VIT_17s0000g01640 N 0.000
gene06360-v1.0-hybrid Fragaria vesca gene06360-v1.0-hybrid N 0.000
Gorai.001G059600 Gossypium raimondii Gorai.001G059600 N 0.000
LjSGA_035337.1 Lotus japonicus LjSGA_035337.1 N 0.000
Lus10016758.g Linum usitatissimum Lus10016758.g N 0.000
MDP0000313526 Malus domestica MDP0000313526 N 0.000
MDP0000574910 Malus domestica MDP0000574910 N 0.000
Pm024489 Prunus mume Pm024489 N 0.000
POPTR_0012s09780 Populus trichocarpa POPTR_0012s09780 N 0.000
PRUPE_ppa001238mg Prunus persica PRUPE_ppa001238mg N 0.000
SapurV1A.0841s0060 Salix purpurea SapurV1A.0841s0060 N 0.000
Thhalv10003624m.g Eutrema salsugineum Thhalv10003624m.g N 0.000