CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

cassava38260.valid.m1 *(Manihot esculenta)* CBF/NF-Y
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02045 (CBFB_NFYA)	IPR001289	cassava38260.valid.m1	T160575_2.00	JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NFYA M08104_2.00	Homo sapiens	NSTGATTGGYB	VRCCAATCASN	ChIP-seq Mathelier et al.(2014) MA0060.3	0.714	0.714
NFYA M09018_2.00	Homo sapiens	YKBYSATTGGYYRV	BYRRCCAATSRVMR	Misc Kulakovskiy et al.(2013) NFYA_HUMAN.H11MO.0.A	0.714	0.714
Nfya M09019_2.00	Mus musculus	YKBYSATTGGYYRV	BYRRCCAATSRVMR	Misc Kulakovskiy et al.(2013) NFYA_MOUSE.H11MO.0.A	0.714	0.714
NFYA M10403_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NFYA_02	0.714	0.714
NFYA M10404_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NFYA_Q5	0.714	0.714
NFYA M10405_2.00	Homo sapiens	NYTGATTGGYTAVH	DBTARCCAATCARN	Transfac Matys et al.(2006) V$NFY_C	0.714	0.714
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
cassava38260.valid.m1	CBF/NF-Y	99	154	EPVYVNAKQYHGILRRRQSRAKAELEKKLIKVRKPYLHESRHLHAMRRARGCGGRF

Links
Other CBF/NF-Y family TFs
Other *Manihot esculenta* TFs