CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOM031533
(
Anopheles coluzzii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ACOM031533
T231410_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DUXA
M01247_2.00
Homo sapiens
NTGATTRNN
NNYAATCAN
PBM
Lambert et al.(2019)
pTH11226
0.605
0.377
DUXA
M03244_2.00
Homo sapiens
NHRAYBYAATCAN
NTGATTRVRTYDN
SELEX
Jolma et al.(2013)
DUXA_1
0.605
0.377
DUXA
M05402_2.00
Homo sapiens
TRAYBYAATCA
TGATTRVRTYA
SELEX
Yin et al.(2017)
DUXA_eDBD_HT-SELEX
0.605
0.377
DUXA
M10756_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DUXA_02
0.605
0.377
DUXA
M05403_2.00
Homo sapiens
YRAYBYAATCA
TGATTRVRTYR
SELEX
Yin et al.(2017)
DUXA_eDBD_Methyl-HT-SELEX
0.605
0.377
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOM031533-PA
Homeodomain
208
264
RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR
ACOM031533-PA
Homeodomain
449
505
RRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKR
Links
Other
Homeodomain
family TFs
Other
Anopheles coluzzii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_1780033
Branchiostoma floridae
estExt_fgenesh2_pg.C_1780033
N
0.661
CGI_10009943
Crassostrea gigas
CGI_10009943
N
0.658
TTRE_0000025001
Trichuris trichiura
TTRE_0000025001
N
0.656
fgenesh2_pg.scaffold_21000109
Branchiostoma floridae
fgenesh2_pg.scaffold_21000109
N
0.652
Myotis_brandtii_HOXD3_10035002
Myotis brandtii
Myotis_brandtii_HOXD3_10035002
N
0.650
ENSLACG00000016556
Latimeria chalumnae
ENSLACG00000016556
N
0.647
ENSTRUG00000009707
Takifugu rubripes
ENSTRUG00000009707
I
0.647
ENSBTAP00000049813-D1
Bos grunniens
ENSBTAP00000049813-D1
I
0.645
ENSTRUG00000015941
Takifugu rubripes
ENSTRUG00000015941
I
0.644
CpipJ_CPIJ014669
Culex pipiens
CpipJ_CPIJ014669
N
0.627
CPIJ014669
Culex quinquefasciatus
CPIJ014669
N
0.627
B-H1
Drosophila ananassae
FBgn0012114
N
0.611
DUXA
Equus caballus
ENSECAG00000021112
I
0.607
DUXA
Felis catus
ENSFCAG00000007545
I
0.607
ENSOARG00000003446
Ovis aries
ENSOARG00000003446
I
0.607
DUXA
Tursiops truncatus
ENSTTRG00000014200
I
0.607
ENSAMEG00000004960
Ailuropoda melanoleuca
ENSAMEG00000004960
I
0.605
ENSCSAG00000001657
Chlorocebus sabaeus
ENSCSAG00000001657
I
0.605
DUXA
Homo sapiens
ENSG00000258873
D
0.605
DUXA
Gorilla gorilla
ENSGGOG00000005650
I
0.605
DUXA
Microcebus murinus
ENSMICG00000006042
I
0.605
DUXA
Macaca mulatta
ENSMMUG00000007788
I
0.605
ENSPANG00000009357
Papio anubis
ENSPANG00000009357
I
0.605
ENSPPYG00000010457
Pongo abelii
ENSPPYG00000010457
I
0.605
DUXA
Pan troglodytes
ENSPTRG00000028871
I
0.605
ENSMMUP00000010232
Macaca fascicularis
ENSMMUP00000010232
I
0.605
BGIBMGA006479
Bombyx mori
BGIBMGA006479
N
0.604
ENSDNOG00000025505
Dasypus novemcinctus
ENSDNOG00000025505
I
0.602
ENSDNOG00000046863
Dasypus novemcinctus
ENSDNOG00000046863
I
0.602
AMIN001735
Anopheles minimus
AMIN001735
N
0.602
ENSMEUG00000014608
Macropus eugenii
ENSMEUG00000014608
N
0.599