CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla000688
(
Citrullus lanatus
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Cla000688
T165295_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla000688
CSD
7
73
SSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVAVI
Links
Other
CSD
family TFs
Other
Citrullus lanatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006148
Ricinus communis
29908.m006148
N
0.727
Ciclev10002696m.g
Citrus clementina
Ciclev10002696m.g
N
0.758
Cucsa.248460
Cucumis sativus
Cucsa.248460
N
0.939
Eucgr.F03759
Eucalyptus grandis
Eucgr.F03759
N
0.742
evm.TU.supercontig_36.17
Carica papaya
evm.TU.supercontig_36.17
N
0.742
Gorai.009G243500
Gossypium raimondii
Gorai.009G243500
N
0.758
Gorai.010G048300
Gossypium raimondii
Gorai.010G048300
N
0.712
Lus10028073.g
Linum usitatissimum
Lus10028073.g
N
0.773
orange1.1g030905m.g
Citrus sinensis
orange1.1g030905m.g
N
0.758
POPTR_0002s08740
Populus trichocarpa
POPTR_0002s08740
N
0.727
POPTR_0005s15990
Populus trichocarpa
POPTR_0005s15990
N
0.742
SapurV1A.0010s0820
Salix purpurea
SapurV1A.0010s0820
N
0.712
TCM_035057
Theobroma cacao
TCM_035057
N
0.758