CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.248460
(
Cucumis sativus
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Cucsa.248460
T165367_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.248460.1
CSD
7
73
STGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVI
Cucsa.248460.2
CSD
7
73
STGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVI
Cucsa.248460.3
CSD
7
73
STGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVI
Links
Other
CSD
family TFs
Other
Cucumis sativus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006148
Ricinus communis
29908.m006148
N
0.712
Ciclev10002696m.g
Citrus clementina
Ciclev10002696m.g
N
0.727
Cla000688
Citrullus lanatus
Cla000688
N
0.939
evm.TU.supercontig_36.17
Carica papaya
evm.TU.supercontig_36.17
N
0.742
Gorai.009G243500
Gossypium raimondii
Gorai.009G243500
N
0.773
Gorai.010G048300
Gossypium raimondii
Gorai.010G048300
N
0.712
Lus10028073.g
Linum usitatissimum
Lus10028073.g
N
0.742
orange1.1g030905m.g
Citrus sinensis
orange1.1g030905m.g
N
0.727
POPTR_0002s08740
Populus trichocarpa
POPTR_0002s08740
N
0.727
POPTR_0005s15990
Populus trichocarpa
POPTR_0005s15990
N
0.742
SapurV1A.0010s0820
Salix purpurea
SapurV1A.0010s0820
N
0.712
TCM_035057
Theobroma cacao
TCM_035057
N
0.758