Rbpj (Mus musculus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSMUSG00000039191 T166091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rbpj
M09021_2.00		 Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		1.000 1.000
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		1.000 1.000
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		1.000 1.000
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		1.000 1.000
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		1.000 1.000
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		1.000 1.000
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		1.000 1.000
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		1.000 1.000
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		1.000 1.000
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		1.000 1.000
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000040694 CSL 74 204
ENSMUSP00000084618 CSL 33 163
ENSMUSP00000109496 CSL 35 165
ENSMUSP00000143846 CSL 13 143
ENSMUSP00000143866 CSL 55 185
ENSMUSP00000144617 CSL 43 173

Links

Other CSL family TFs
Other Mus musculus TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I
29917.m002016 Ricinus communis 29917.m002016 I
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N
anac044 Arabidopsis thaliana AT3G01600 N
anac085 Arabidopsis lyrata Al_scaffold_0006_1351 I
anac085 Arabidopsis thaliana AT5G14490 I
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I
Bo5g043100 Brassica oleracea Bo5g043100 I
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I
Bostr.2902s0186 Boechera stricta Bostr.2902s0186 I
Bra001000 Brassica rapa Bra001000 N
Bra006257 Brassica rapa Bra006257 I
Bra024733 Brassica rapa Bra024733 I
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N
Cagra.3166s0054 Capsella grandiflora Cagra.3166s0054 I
Carubv10002665m.g Capsella rubella Carubv10002665m.g I
Carubv10009087m.g Capsella rubella Carubv10009087m.g I
Carubv10014004m.g Capsella rubella Carubv10014004m.g N
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I
cassava14633.m1 Manihot esculenta cassava14633.m1 I
cassava3690.m1 Manihot esculenta cassava3690.m1 I
Ca_23230 Cicer arietinum Ca_23230 N
Ca_24772 Cicer arietinum Ca_24772 I
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I
Cla004701 Citrullus lanatus Cla004701 I
Cla020673 Citrullus lanatus Cla020673 I
Cucsa.011210 Cucumis sativus Cucsa.011210 I
Cucsa.283900 Cucumis sativus Cucsa.283900 I
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I
F775_30638 Aegilops tauschii F775_30638 I
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I
GLYMA01G22510 Glycine max GLYMA01G22510 I
GLYMA02G11140 Glycine max GLYMA02G11140 I
GLYMA16G07501 Glycine max GLYMA16G07501 N
GLYMA19G00640 Glycine max GLYMA19G00640 N
GLYMA19G08510 Glycine max GLYMA19G08510 N
GLYMA20G32690 Glycine max GLYMA20G32690 I
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I
GSMUA_Achr6G11230_001 Musa acuminata GSMUA_Achr6G11230_001 I
Lus10003668.g Linum usitatissimum Lus10003668.g N
Lus10021708.g Linum usitatissimum Lus10021708.g I
MDP0000283975 Malus domestica MDP0000283975 N
MDP0000663564 Malus domestica MDP0000663564 I
mgf012882m Mimulus guttatus mgf012882m I
mgf018486m Mimulus guttatus mgf018486m I
MTR_1g093670 Medicago truncatula MTR_1g093670 I
MTR_1g093680 Medicago truncatula MTR_1g093680 I
MTR_5g053430 Medicago truncatula MTR_5g053430 I
MTR_7g033320 Medicago truncatula MTR_7g033320 I
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I
PK17141.1 Cannabis sativa PK17141.1 I
PK25812.1 Cannabis sativa PK25812.1 I
Pm015625 Prunus mume Pm015625 I
Pm029010 Prunus mume Pm029010 I
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I
Si024889m.g Setaria italica Si024889m.g I
SOG1 Vitis vinifera VIT_01s0011g02990 I
SOG1 Arabidopsis thaliana AT1G25580 I
SOG1 Arabidopsis lyrata scaffold_102939.1 I
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I
TCM_011869 Theobroma cacao TCM_011869 I
TCM_016984 Theobroma cacao TCM_016984 I
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I
Thhalv10015728m.g Eutrema salsugineum Thhalv10015728m.g N
Thhalv10022099m.g Eutrema salsugineum Thhalv10022099m.g N
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I
TRIUR3_21992 Triticum urartu TRIUR3_21992 I
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I