RBPJ (Vicugna pacos)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSVPAG00000003620 T166142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.959 0.959
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.959 0.959
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.959 0.959
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.959 0.959
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.959 0.959
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.959 0.959
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.959 0.959
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.959 0.959
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.959 0.959
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.959 0.959
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.959 0.959
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.959 0.959
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.959 0.959
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000003356 CSL 28 108

Links

Other CSL family TFs
Other Vicugna pacos TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006419 Aedes aegypti AAEL006419 I 0.712
ACEP17167 Atta cephalotes ACEP17167 I 0.753
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.959
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.824
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.740
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.762
CapteG179039 Capitella teleta CapteG179039 I 0.726
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.753
CLEC005205 Cimex lectularius CLEC005205 I 0.726
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.959
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.959
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.945
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.959
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.904
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.959
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.959
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.959
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.959
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.959
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.877
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I 0.932
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.959
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.959
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.753
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.959
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.959
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.945
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.959
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.959
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.726
GB45655 Apis mellifera GB45655 I 0.753
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.765
HMEL017244 Heliconius melpomene HMEL017244 I 0.753
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.740
KGM_08407 Danaus plexippus KGM_08407 I 0.753
L798_15068 Zootermopsis nevadensis L798_15068 I 0.740
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.767
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.959
NECAME_17145 Necator americanus NECAME_17145 I 0.714
NV17858 Nasonia vitripennis NV17858 I 0.767
NV17967 Nasonia vitripennis NV17967 I 0.726
PHUM462870 Pediculus humanus PHUM462870 I 0.726
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.959
RBPJ Bos taurus ENSBTAG00000003602 I 0.959
rbpj Xenopus tropicalis XB-GENE-490756 I 0.959
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.959
RBPJ Canis familiaris ENSCAFG00000016387 I 0.959
Rbpj Mus musculus ENSMUSG00000039191 D 0.959
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.959
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.890
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.959
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.959
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.959
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.959
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.959
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.945
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.959
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.959
RBPJ Equus caballus ENSECAG00000019257 I 0.959
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.959
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.959
Rbpj Rattus norvegicus ENSRNOG00000007797 I 0.890
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.959
RBPJ Sorex araneus ENSSARG00000001169 I 0.959
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.959
RBPJ Sus scrofa ENSSSCG00000022155 I 0.959
RBPJ Homo sapiens ENSG00000168214 D 1.000
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.959
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.959
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.959
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.959
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.959
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.904
rbpja Danio rerio ENSDARG00000003398 I 0.959
rbpjb Danio rerio ENSDARG00000052091 I 0.918
RPRC014254 Rhodnius prolixus RPRC014254 I 0.726
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.753
SINV15808 Solenopsis invicta SINV15808 I 0.753
SMAR001432 Strigamia maritima SMAR001432 I 0.712
TC014468 Tribolium castaneum TC014468 I 0.767