CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FBXL19
(
Callithrix jacchus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSCJAG00000002985
T167879_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.894
0.894
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.851
0.851
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.851
0.851
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.830
0.830
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.787
0.787
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.766
0.766
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000005427
CxxC
10
56
GERRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
ENSCJAP00000005430
CxxC
31
77
GARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC
Links
Other
CxxC
family TFs
Other
Callithrix jacchus
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29646.m001108
Ricinus communis
29646.m001108
N
0.000
AC233853.1_FG002
Zea mays
AC233853.1_FG002
N
0.000
Aquca_005_00119
Aquilegia coerulea
Aquca_005_00119
N
0.000
Aquca_051_00100
Aquilegia coerulea
Aquca_051_00100
N
0.000
ATBZIP34
Arabidopsis lyrata
fgenesh2_kg.4__2390__AT2G42380.2
N
0.000
ATBZIP61
Arabidopsis lyrata
fgenesh2_kg.5__2254__AT3G58120.1
N
0.000
BGIOSGA007886
Oryza indica
BGIOSGA007886
N
0.000
Bo4g015960
Brassica oleracea
Bo4g015960
N
0.000
Bo6g074510
Brassica oleracea
Bo6g074510
N
0.000
Bostr.18722s0001
Boechera stricta
Bostr.18722s0001
N
0.000
Bostr.20903s0063
Boechera stricta
Bostr.20903s0063
N
0.000
Bra000256
Brassica rapa
Bra000256
N
0.000
Bra003320
Brassica rapa
Bra003320
N
0.000
Bra004689
Brassica rapa
Bra004689
N
0.000
Bra007380
Brassica rapa
Bra007380
N
0.000
BRADI2G06790
Brachypodium distachyon
BRADI2G06790
N
0.000
BZIP02
Oryza sativa
OS01G0211800
N
0.000
BZIP34
Arabidopsis thaliana
AT2G42380
N
0.000
BZIP61
Arabidopsis thaliana
AT3G58120
N
0.000
Cagra.0686s0029
Capsella grandiflora
Cagra.0686s0029
N
0.000
Cagra.2636s0024
Capsella grandiflora
Cagra.2636s0024
N
0.000
Carubv10017617m.g
Capsella rubella
Carubv10017617m.g
N
0.000
Carubv10023644m.g
Capsella rubella
Carubv10023644m.g
N
0.000
cassava15850.m1
Manihot esculenta
cassava15850.m1
N
0.000
Ca_02472
Cicer arietinum
Ca_02472
N
0.000
Ca_11292
Cicer arietinum
Ca_11292
N
0.000
chr3.CM0160.1080.nc
Lotus japonicus
chr3.CM0160.1080.nc
N
0.000
Ciclev10008720m.g
Citrus clementina
Ciclev10008720m.g
N
0.000
Ciclev10015966m.g
Citrus clementina
Ciclev10015966m.g
N
0.000
Cla015875
Citrullus lanatus
Cla015875
N
0.000
Cucsa.122790
Cucumis sativus
Cucsa.122790
N
0.000
Cucsa.148840
Cucumis sativus
Cucsa.148840
N
0.000
Cucsa.309420
Cucumis sativus
Cucsa.309420
N
0.000
estExt_fgenesh1_pg.C_160081
Physcomitrella patens
estExt_fgenesh1_pg.C_160081
N
0.000
estExt_fgenesh1_pg.C_220219
Physcomitrella patens
estExt_fgenesh1_pg.C_220219
N
0.000
Eucgr.K01085
Eucalyptus grandis
Eucgr.K01085
N
0.000
evm.TU.supercontig_209.8
Carica papaya
evm.TU.supercontig_209.8
N
0.000
gene17796-v1.0-hybrid
Fragaria vesca
gene17796-v1.0-hybrid
N
0.000
gene27194-v1.0-hybrid
Fragaria vesca
gene27194-v1.0-hybrid
N
0.000
GLYMA06G43760
Glycine max
GLYMA06G43760
N
0.000
GLYMA12G14130
Glycine max
GLYMA12G14130
N
0.000
GLYMA12G33600
Glycine max
GLYMA12G33600
N
0.000
GLYMA13G34770
Glycine max
GLYMA13G34770
N
0.000
GLYMA13G36870
Glycine max
GLYMA13G36870
N
0.000
Gorai.002G064900
Gossypium raimondii
Gorai.002G064900
N
0.000
Gorai.013G172500
Gossypium raimondii
Gorai.013G172500
N
0.000
GSMUA_Achr4G10560_001
Musa acuminata
GSMUA_Achr4G10560_001
N
0.000
GSMUA_Achr6G26930_001
Musa acuminata
GSMUA_Achr6G26930_001
N
0.000
GSMUA_Achr9G06540_001
Musa acuminata
GSMUA_Achr9G06540_001
N
0.000
LPERR01G06720
Leersia perrieri
LPERR01G06720
N
0.000
Lus10002185.g
Linum usitatissimum
Lus10002185.g
N
0.000
Lus10017656.g
Linum usitatissimum
Lus10017656.g
N
0.000
Lus10033630.g
Linum usitatissimum
Lus10033630.g
N
0.000
MDP0000133698
Malus domestica
MDP0000133698
N
0.000
MDP0000555457
Malus domestica
MDP0000555457
N
0.000
mgf003967m
Mimulus guttatus
mgf003967m
N
0.000
MLOC_72368
Hordeum vulgare
MLOC_72368
N
0.000
MTR_2g090900
Medicago truncatula
MTR_2g090900
N
0.000
MTR_4g079500
Medicago truncatula
MTR_4g079500
N
0.000
OB01G17130
Oryza brachyantha
OB01G17130
N
0.000
OBART01G07120
Oryza barthii
OBART01G07120
N
0.000
OBART02G10550
Oryza barthii
OBART02G10550
N
0.000
OGLUM01G08020
Oryza glumaepatula
OGLUM01G08020
N
0.000
OGLUM02G10470
Oryza glumaepatula
OGLUM02G10470
N
0.000
OLONG_003093
Oryza longistaminata
OLONG_003093
N
0.000
OMERI02G11410
Oryza meridionalis
OMERI02G11410
N
0.000
ONIVA01G09160
Oryza nivara
ONIVA01G09160
N
0.000
ONIVA02G11660
Oryza nivara
ONIVA02G11660
N
0.000
OPUNC01G06850
Oryza punctata
OPUNC01G06850
N
0.000
OPUNC01G30390
Oryza punctata
OPUNC01G30390
N
0.000
OPUNC02G09400
Oryza punctata
OPUNC02G09400
N
0.000
orange1.1g037696m.g
Citrus sinensis
orange1.1g037696m.g
N
0.000
ORGLA02G0094900
Oryza glaberrima
ORGLA02G0094900
N
0.000
ORUFI01G07680
Oryza rufipogon
ORUFI01G07680
N
0.000
ORUFI02G10470
Oryza rufipogon
ORUFI02G10470
N
0.000
Pavir.Eb03400
Panicum virgatum
Pavir.Eb03400
N
0.000
Pavir.J05339
Panicum virgatum
Pavir.J05339
N
0.000
Pavir.J11397
Panicum virgatum
Pavir.J11397
N
0.000
PGSC0003DMG400009388
Solanum tuberosum
PGSC0003DMG400009388
N
0.000
PGSC0003DMG401007810
Solanum tuberosum
PGSC0003DMG401007810
N
0.000
PK16223.1
Cannabis sativa
PK16223.1
N
0.000
PK21227.1
Cannabis sativa
PK21227.1
N
0.000
Pm014253
Prunus mume
Pm014253
N
0.000
POPTR_0013s12810
Populus trichocarpa
POPTR_0013s12810
N
0.000
PRUPE_ppa016271mg
Prunus persica
PRUPE_ppa016271mg
N
0.000
PRUPE_ppa022385mg
Prunus persica
PRUPE_ppa022385mg
N
0.000
SapurV1A.0083s0430
Salix purpurea
SapurV1A.0083s0430
N
0.000
SapurV1A.0474s0270
Salix purpurea
SapurV1A.0474s0270
N
0.000
SapurV1A.0500s0200
Salix purpurea
SapurV1A.0500s0200
N
0.000
SapurV1A.1835s0070
Salix purpurea
SapurV1A.1835s0070
N
0.000
SapurV1A.1977s0020
Salix purpurea
SapurV1A.1977s0020
N
0.000
Sb03g002050
Sorghum bicolor
Sb03g002050
N
0.000
Solyc07g053450.2
Solanum lycopersicum
Solyc07g053450.2
N
0.000
Solyc07g062710.2
Solanum lycopersicum
Solyc07g062710.2
N
0.000
Solyc12g010800.1
Solanum lycopersicum
Solyc12g010800.1
N
0.000
TCM_003607
Theobroma cacao
TCM_003607
N
0.000
TCM_031686
Theobroma cacao
TCM_031686
N
0.000
Thhalv10006090m.g
Eutrema salsugineum
Thhalv10006090m.g
N
0.000
Thhalv10016923m.g
Eutrema salsugineum
Thhalv10016923m.g
N
0.000
Traes_2BS_C9A338257
Triticum aestivum
Traes_2BS_C9A338257
N
0.000
VIT_12s0028g02590
Vitis vinifera
VIT_12s0028g02590
N
0.000