CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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dnmt1
(
Tetraodon nigroviridis
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSTNIG00000018567
T168361_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DNMT1
M01913_2.00
Homo sapiens
NNNNNCGGNN
NNCCGNNNNN
PBM
Weirauch et al.(2014)
pTH7029
0.745
0.745
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000019029
CxxC
364
410
VVGVKRHRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRC
ENSTNIP00000021741
CxxC
352
398
VVGVKRHRCGVCEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRC
Links
Other
CxxC
family TFs
Other
Tetraodon nigroviridis
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R006371
Calypte anna
Aan_R006371
I
0.723
Afo_R010037
Aptenodytes forsteri
Afo_R010037
I
0.723
Alligator_sinensis_CCG017947.1
Alligator sinensis
Alligator_sinensis_CCG017947.1
I
0.723
Aqu1.224590
Amphimedon queenslandica
Aqu1.224590
I
0.702
CapteG160905
Capitella teleta
CapteG160905
I
0.723
Cflo_12808--XP_001122269.1_APIME
Camponotus floridanus
Cflo_12808--XP_001122269.1_APIME
I
0.745
CGI_10021920
Crassostrea gigas
CGI_10021920
I
0.766
Cmyd_10002310
Chelonia mydas
Cmyd_10002310
I
0.745
DNMT1
Tursiops truncatus
ENSTTRG00000003178
I
0.723
DNMT1
Procavia capensis
ENSPCAG00000011023
I
0.745
DNMT1
Vicugna pacos
ENSVPAG00000006117
I
0.745
DNMT1
Microcebus murinus
ENSMICG00000010231
I
0.745
DNMT1
Pan troglodytes
ENSPTRG00000010461
I
0.745
DNMT1
Myotis lucifugus
ENSMLUG00000001347
I
0.745
DNMT1
Macaca mulatta
ENSMMUG00000014604
I
0.745
DNMT1
Monodelphis domestica
ENSMODG00000005463
I
0.745
dnmt1
Oryzias latipes
ENSORLG00000005582
I
0.872
Dnmt1
Mus musculus
ENSMUSG00000004099
I
0.723
dnmt1
Takifugu rubripes
ENSTRUG00000008132
I
1.000
DNMT1
Sus scrofa
ENSSSCG00000013659
I
0.745
Dnmt1
Rattus norvegicus
ENSRNOG00000039859
I
0.723
DNMT1
Otolemur garnettii
ENSOGAG00000001265
I
0.745
DNMT1
Pteropus vampyrus
ENSPVAG00000003676
I
0.745
DNMT1
Ochotona princeps
ENSOPRG00000007032
I
0.723
DNMT1
Gorilla gorilla
ENSGGOG00000016574
I
0.745
DNMT1
Anolis carolinensis
ENSACAG00000003948
I
0.766
dnmt1
Xenopus tropicalis
XB-GENE-965562
I
0.723
DNMT1
Bos taurus
ENSBTAG00000002736
I
0.723
DNMT1
Canis familiaris
ENSCAFG00000017892
I
0.723
DNMT1
Callithrix jacchus
ENSCJAG00000005794
I
0.745
DNMT1
Cavia porcellus
ENSCPOG00000019557
I
0.745
dnmt1
Danio rerio
ENSDARG00000030756
I
0.830
DNMT1
Dasypus novemcinctus
ENSDNOG00000003313
I
0.745
Dnmt1
Dipodomys ordii
ENSDORG00000014116
I
0.723
DNMT1
Equus caballus
ENSECAG00000026909
I
0.745
DNMT1
Echinops telfairi
ENSETEG00000012574
I
0.723
DNMT1
Felis catus
ENSFCAG00000012246
I
0.745
DNMT1
Homo sapiens
ENSG00000130816
D
0.745
dnmt1
Gasterosteus aculeatus
ENSGACG00000013741
I
0.851
DNMT1
Loxodonta africana
ENSLAFG00000002818
I
0.745
dnmt1.L
Xenopus laevis
XB-GENE-965566
I
0.702
dnmt1.S
Xenopus laevis
XB-GENE-17332488
I
0.702
ENSAMEG00000011823
Ailuropoda melanoleuca
ENSAMEG00000011823
I
0.723
ENSAMXG00000012182
Astyanax mexicanus
ENSAMXG00000012182
I
0.787
ENSCSAG00000007378
Chlorocebus sabaeus
ENSCSAG00000007378
I
0.745
ENSFALG00000007760
Ficedula albicollis
ENSFALG00000007760
I
0.723
ENSGALG00000028997
Gallus gallus
ENSGALG00000028997
I
0.723
ENSGMOG00000003491
Gadus morhua
ENSGMOG00000003491
I
0.830
ENSLOCG00000007421
Lepisosteus oculatus
ENSLOCG00000007421
I
0.787
ENSMEUG00000012650
Macropus eugenii
ENSMEUG00000012650
I
0.745
ENSMPUG00000006829
Mustela putorius furo
ENSMPUG00000006829
I
0.723
ENSNLEG00000012092
Nomascus leucogenys
ENSNLEG00000012092
I
0.745
ENSOANG00000012255
Ornithorhynchus anatinus
ENSOANG00000012255
I
0.745
ENSOARG00000015380
Ovis aries
ENSOARG00000015380
I
0.723
ENSOCUG00000008415
Oryctolagus cuniculus
ENSOCUG00000008415
I
0.745
ENSONIG00000001574
Oreochromis niloticus
ENSONIG00000001574
I
0.872
ENSP00000352516
Macaca fascicularis
ENSP00000352516
I
0.745
ENSP00000352516-D1
Bos grunniens
ENSP00000352516-D1
I
0.723
ENSPANG00000001264
Papio anubis
ENSPANG00000001264
I
0.745
ENSPFOG00000005624
Poecilia formosa
ENSPFOG00000005624
I
0.936
ENSPPYG00000009545
Pongo abelii
ENSPPYG00000009545
I
0.745
ENSPSIG00000002916
Pelodiscus sinensis
ENSPSIG00000002916
I
0.745
ENSSHAG00000008894
Sarcophilus harrisii
ENSSHAG00000008894
I
0.745
ENSSTOG00000010841
Ictidomys tridecemlineatus
ENSSTOG00000010841
I
0.745
ENSXMAG00000018063
Xiphophorus maculatus
ENSXMAG00000018063
I
0.936
e_gw.24.105.1
Branchiostoma floridae
e_gw.24.105.1
I
0.723
GB47348
Apis mellifera
GB47348
I
0.745
GB48403
Apis mellifera
GB48403
I
0.787
Gfo_R002685
Geospiza fortis
Gfo_R002685
I
0.723
HelroG116156
Helobdella robusta
HelroG116156
I
0.723
Hsal_00444--XP_001122269.1_APIME
Harpegnathos saltator
Hsal_00444--XP_001122269.1_APIME
N
0.702
LDEC005925
Leptinotarsa decemlineata
LDEC005925
N
0.745
LotgiG171288
Lottia gigantea
LotgiG171288
I
0.787
Myotis_brandtii_DNMT1_10007965
Myotis brandtii
Myotis_brandtii_DNMT1_10007965
I
0.745
NV11649
Nasonia vitripennis
NV11649
I
0.723
Ocbimv22034501m.g
Octopus bimaculoides
Ocbimv22034501m.g
I
0.702
Ogr12994
Ophisaurus gracilis
Ogr12994
I
0.787
Pvit_03471
Pogona vitticeps
Pvit_03471
I
0.745
Sakowv30005306m.g
Saccoglossus kowalevskii
Sakowv30005306m.g
I
0.723
SPU_023599
Strongylocentrotus purpuratus
SPU_023599
N
0.766