Gfo_R013982 (Geospiza fortis)
CxxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02008 (zf-CXXC) IPR002857 Gfo_R013982 T168614_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000004157_CONSTRUCT
M01920_2.00 		PBM CONSTRUCTS
NNNNRVGBNN
NNVCBYNNNN		 PBM
Weirauch et al.(2014)
pTH9719 		1.000 1.000
TET1
M01914_2.00 		Homo sapiens
NNHVCGHNN
NNDCGBDNN		 PBM
Weirauch et al.(2014)
pTH9605 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R013982 CxxC 8 49

Links

Other CxxC family TFs
Other Geospiza fortis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_21956 Hordeum vulgare MLOC_21956 N 0.000
Traes_1AL_1751C4BBF Triticum aestivum Traes_1AL_1751C4BBF N 0.000
Traes_1AS_1751C4BBF Triticum aestivum Traes_1AS_1751C4BBF N 0.000
Traes_2AL_1751C4BBF Triticum aestivum Traes_2AL_1751C4BBF N 0.000
Traes_2BL_50F11D27C Triticum aestivum Traes_2BL_50F11D27C N 0.000
Traes_2BS_1751C4BBF Triticum aestivum Traes_2BS_1751C4BBF N 0.000
Traes_2DL_437FFAD8D Triticum aestivum Traes_2DL_437FFAD8D N 0.000
Traes_3B_9769B2425 Triticum aestivum Traes_3B_9769B2425 N 0.000
Traes_4AL_4031B00F8 Triticum aestivum Traes_4AL_4031B00F8 N 0.000
Traes_4DL_4491B8DE1 Triticum aestivum Traes_4DL_4491B8DE1 N 0.000
Traes_5BL_BDBA68122 Triticum aestivum Traes_5BL_BDBA68122 N 0.000
Traes_5BL_C1D0FDB41 Triticum aestivum Traes_5BL_C1D0FDB41 N 0.000
Traes_5DL_BDDD63886 Triticum aestivum Traes_5DL_BDDD63886 N 0.000
Traes_6AS_606EE58D3 Triticum aestivum Traes_6AS_606EE58D3 N 0.000
Traes_6BS_A6B78A507 Triticum aestivum Traes_6BS_A6B78A507 N 0.000
Traes_6DL_555CC5E1E Triticum aestivum Traes_6DL_555CC5E1E N 0.000
Traes_6DL_6BFC1BFFF Triticum aestivum Traes_6DL_6BFC1BFFF N 0.000
Traes_7AS_1751C4BBF Triticum aestivum Traes_7AS_1751C4BBF N 0.000
Traes_7BL_A201C1A09 Triticum aestivum Traes_7BL_A201C1A09 N 0.000
Traes_7BL_B08686A46 Triticum aestivum Traes_7BL_B08686A46 N 0.000
Traes_7BS_976F84CAE Triticum aestivum Traes_7BS_976F84CAE N 0.000
Traes_7DS_BA2B07F73 Triticum aestivum Traes_7DS_BA2B07F73 N 0.000