SELMODRAFT_429122 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_429122 T171142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.170.52.1
M01952_2.00 		Physcomitrella patens
NNNCTTTHNN
NNDAAAGNNN		 PBM
Weirauch et al.(2014)
pTH8464 		0.525 0.525
gw1.12.257.1
M01955_2.00 		Physcomitrella patens
NNDDNNN
NNNHHNN		 PBM
Weirauch et al.(2014)
pTH8651 		0.525 0.525
DOF1.6
M06831_2.00 		Arabidopsis thaliana
HYACTTTWNNN
NNNWAAAGTRD		 Dap-seq
OMalley et al.(2016)
AT1G47655_col_a 		0.508 0.508
DOF1.6
M06832_2.00 		Arabidopsis thaliana
YYYTTDNCTTTWYBN
NVRWAAAGNHAARRR		 Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a 		0.508 0.508
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ08198 Dof 52 117

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00069p00049300 Amborella trichopoda AMTR_s00069p00049300 I 0.525
Bo3g143320 Brassica oleracea Bo3g143320 I 0.508
Bo6g010470 Brassica oleracea Bo6g010470 I 0.508
Bostr.15654s0062 Boechera stricta Bostr.15654s0062 I 0.508
Bra010884 Brassica rapa Bra010884 I 0.508
Bra015609 Brassica rapa Bra015609 I 0.508
Bra027722 Brassica rapa Bra027722 I 0.508
Cagra.13365s0005 Capsella grandiflora Cagra.13365s0005 I 0.508
Carubv10010283m.g Capsella rubella Carubv10010283m.g I 0.508
Ca_00318 Cicer arietinum Ca_00318 I 0.508
Ca_19648 Cicer arietinum Ca_19648 I 0.508
Cla005140 Citrullus lanatus Cla005140 I 0.508
Cucsa.207460 Cucumis sativus Cucsa.207460 I 0.508
DOF1.6 Arabidopsis thaliana AT1G47655 D 0.508
e_gw1.170.52.1 Physcomitrella patens e_gw1.170.52.1 D 0.525
fgenesh2_kg.1__3864__AT1G47655.1 Arabidopsis lyrata fgenesh2_kg.1__3864__AT1G47655.1 I 0.508
gene25330-v1.0-hybrid Fragaria vesca gene25330-v1.0-hybrid I 0.508
GSMUA_Achr11G21760_001 Musa acuminata GSMUA_Achr11G21760_001 I 0.508
GSMUA_Achr11G23850_001 Musa acuminata GSMUA_Achr11G23850_001 I 0.508
GSMUA_Achr4G27160_001 Musa acuminata GSMUA_Achr4G27160_001 I 0.508
gw1.12.257.1 Physcomitrella patens gw1.12.257.1 D 0.525
gw1.341.75.1 Physcomitrella patens gw1.341.75.1 I 0.527
gw1.4.467.1 Chlorella NC64A gw1.4.467.1 I 0.519
Lus10007774.g Linum usitatissimum Lus10007774.g I 0.508
MDP0000188242 Malus domestica MDP0000188242 I 0.508
MDP0000271624 Malus domestica MDP0000271624 I 0.508
MDP0000282021 Malus domestica MDP0000282021 I 0.508
MDP0000315002 Malus domestica MDP0000315002 I 0.508
MDP0000429215 Malus domestica MDP0000429215 I 0.508
mgf015387m Mimulus guttatus mgf015387m I 0.525
OS12G0590700 Oryza sativa OS12G0590700 I 0.545
Pavir.Ia01590 Panicum virgatum Pavir.Ia01590 I 0.509
PGSC0003DMG400029191 Solanum tuberosum PGSC0003DMG400029191 I 0.508
SELMODRAFT_19636 Selaginella moellendorffii SELMODRAFT_19636 I 0.963
SELMODRAFT_19637 Selaginella moellendorffii SELMODRAFT_19637 I 0.963
SELMODRAFT_19640 Selaginella moellendorffii SELMODRAFT_19640 I 0.898
SELMODRAFT_19643 Selaginella moellendorffii SELMODRAFT_19643 I 0.898
SELMODRAFT_28956 Selaginella moellendorffii SELMODRAFT_28956 I 0.898
SELMODRAFT_28959 Selaginella moellendorffii SELMODRAFT_28959 I 0.881
SELMODRAFT_29096 Selaginella moellendorffii SELMODRAFT_29096 I 0.915
SELMODRAFT_29097 Selaginella moellendorffii SELMODRAFT_29097 I 0.898
SELMODRAFT_29099 Selaginella moellendorffii SELMODRAFT_29099 I 0.915
SELMODRAFT_29567 Selaginella moellendorffii SELMODRAFT_29567 I 0.712
SELMODRAFT_409864 Selaginella moellendorffii SELMODRAFT_409864 I 0.983
SELMODRAFT_410014 Selaginella moellendorffii SELMODRAFT_410014 I 0.966
SELMODRAFT_414369 Selaginella moellendorffii SELMODRAFT_414369 I 0.983
SELMODRAFT_417529 Selaginella moellendorffii SELMODRAFT_417529 I 0.983
SELMODRAFT_418000 Selaginella moellendorffii SELMODRAFT_418000 N 0.644
SELMODRAFT_419294 Selaginella moellendorffii SELMODRAFT_419294 I 0.983
SELMODRAFT_419297 Selaginella moellendorffii SELMODRAFT_419297 I 0.983
SELMODRAFT_425594 Selaginella moellendorffii SELMODRAFT_425594 I 0.966
SELMODRAFT_425596 Selaginella moellendorffii SELMODRAFT_425596 I 0.879
SELMODRAFT_425609 Selaginella moellendorffii SELMODRAFT_425609 I 0.983
SELMODRAFT_429125 Selaginella moellendorffii SELMODRAFT_429125 I 0.983
SELMODRAFT_430854 Selaginella moellendorffii SELMODRAFT_430854 I 0.949
SELMODRAFT_439283 Selaginella moellendorffii SELMODRAFT_439283 I 0.508
SELMODRAFT_9042 Selaginella moellendorffii SELMODRAFT_9042 I 0.763
Solyc06g005130.2 Solanum lycopersicum Solyc06g005130.2 I 0.508
Thhalv10011762m.g Eutrema salsugineum Thhalv10011762m.g I 0.525
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.519