SELMODRAFT_425596 (Selaginella moellendorffii)
Dof

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02701 (zf-Dof) IPR003851 SELMODRAFT_425596 T171140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.170.52.1
M01952_2.00 		Physcomitrella patens
NNNCTTTHNN
NNDAAAGNNN		 PBM
Weirauch et al.(2014)
pTH8464 		0.517 0.517
gw1.12.257.1
M01955_2.00 		Physcomitrella patens
NNDDNNN
NNNHHNN		 PBM
Weirauch et al.(2014)
pTH8651 		0.517 0.517
DOF1.6
M06831_2.00 		Arabidopsis thaliana
HYACTTTWNNN
NNNWAAAGTRD		 Dap-seq
OMalley et al.(2016)
AT1G47655_col_a 		0.517 0.517
DOF1.6
M06832_2.00 		Arabidopsis thaliana
YYYTTDNCTTTWYBN
NVRWAAAGNHAARRR		 Dap-seq
OMalley et al.(2016)
AT1G47655_colamp_a 		0.517 0.517
For this family, TFs with SR scores > 0.508 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ12227 Dof 52 116

Links

Other Dof family TFs
Other Selaginella moellendorffii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SELMODRAFT_28956 Selaginella moellendorffii SELMODRAFT_28956 I 0.914
SELMODRAFT_19637 Selaginella moellendorffii SELMODRAFT_19637 I 0.914
SELMODRAFT_19636 Selaginella moellendorffii SELMODRAFT_19636 I 0.914
SELMODRAFT_429125 Selaginella moellendorffii SELMODRAFT_429125 I 0.897
SELMODRAFT_414369 Selaginella moellendorffii SELMODRAFT_414369 I 0.897
SELMODRAFT_19643 Selaginella moellendorffii SELMODRAFT_19643 I 0.897
SELMODRAFT_28959 Selaginella moellendorffii SELMODRAFT_28959 I 0.897
SELMODRAFT_409864 Selaginella moellendorffii SELMODRAFT_409864 I 0.897
SELMODRAFT_417529 Selaginella moellendorffii SELMODRAFT_417529 I 0.897
SELMODRAFT_19640 Selaginella moellendorffii SELMODRAFT_19640 I 0.897
SELMODRAFT_419294 Selaginella moellendorffii SELMODRAFT_419294 I 0.897
SELMODRAFT_425594 Selaginella moellendorffii SELMODRAFT_425594 I 0.897
SELMODRAFT_425609 Selaginella moellendorffii SELMODRAFT_425609 I 0.897
SELMODRAFT_419297 Selaginella moellendorffii SELMODRAFT_419297 I 0.897
SELMODRAFT_29096 Selaginella moellendorffii SELMODRAFT_29096 I 0.879
SELMODRAFT_429122 Selaginella moellendorffii SELMODRAFT_429122 I 0.879
SELMODRAFT_410014 Selaginella moellendorffii SELMODRAFT_410014 I 0.879
SELMODRAFT_29099 Selaginella moellendorffii SELMODRAFT_29099 I 0.879
SELMODRAFT_29097 Selaginella moellendorffii SELMODRAFT_29097 I 0.862
SELMODRAFT_430854 Selaginella moellendorffii SELMODRAFT_430854 I 0.862
SELMODRAFT_9042 Selaginella moellendorffii SELMODRAFT_9042 I 0.776
SELMODRAFT_29567 Selaginella moellendorffii SELMODRAFT_29567 I 0.707
SELMODRAFT_418000 Selaginella moellendorffii SELMODRAFT_418000 N 0.621
Solyc06g005130.2 Solanum lycopersicum Solyc06g005130.2 I 0.534
gw1.69.138.1 Physcomitrella patens gw1.69.138.1 I 0.534
PGSC0003DMG400029191 Solanum tuberosum PGSC0003DMG400029191 I 0.534
Thhalv10011762m.g Eutrema salsugineum Thhalv10011762m.g I 0.534
Traes_1DL_56A46D571 Triticum aestivum Traes_1DL_56A46D571 I 0.519
Aquca_007_00464 Aquilegia coerulea Aquca_007_00464 I 0.517
mgf015387m Mimulus guttatus mgf015387m I 0.517
Bostr.15654s0062 Boechera stricta Bostr.15654s0062 I 0.517
Carubv10010283m.g Capsella rubella Carubv10010283m.g I 0.517
Pavir.Ia01590 Panicum virgatum Pavir.Ia01590 I 0.517
Lus10007774.g Linum usitatissimum Lus10007774.g I 0.517
Gorai.010G152100 Gossypium raimondii Gorai.010G152100 I 0.517
gw1.12.257.1 Physcomitrella patens gw1.12.257.1 D 0.517
Cagra.13365s0005 Capsella grandiflora Cagra.13365s0005 I 0.517
Pm005741 Prunus mume Pm005741 I 0.517
MLOC_72949 Hordeum vulgare MLOC_72949 I 0.517
PGSC0003DMG400018886 Solanum tuberosum PGSC0003DMG400018886 I 0.517
PRUPE_ppa008939mg Prunus persica PRUPE_ppa008939mg I 0.517
AMTR_s00069p00049300 Amborella trichopoda AMTR_s00069p00049300 I 0.517
fgenesh2_kg.1__3864__AT1G47655.1 Arabidopsis lyrata fgenesh2_kg.1__3864__AT1G47655.1 I 0.517
Bra015609 Brassica rapa Bra015609 I 0.517
e_gw1.170.52.1 Physcomitrella patens e_gw1.170.52.1 D 0.517
Sb01g018240 Sorghum bicolor Sb01g018240 I 0.517
DOF1.6 Arabidopsis thaliana AT1G47655 D 0.517
Bo6g010470 Brassica oleracea Bo6g010470 I 0.517
fgenesh1_pg.scaffold_169000096 Physcomitrella patens fgenesh1_pg.scaffold_169000096 I 0.517