CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000003322
(
Ficedula albicollis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
ENSFALG00000003322
T172595_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.985
0.985
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.985
0.985
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.779
0.779
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000003460
E2F
112
194
NGKGLRHFSMKVCEKVQRKGTTSYNEVADELVAEFTTTDNHISPNESQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIG
Links
Other
E2F
family TFs
Other
Ficedula albicollis
TFs
574 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m011156
Ricinus communis
30190.m011156
I
ACOC_0000071501
Angiostrongylus costaricensis
ACOC_0000071501
I
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
AMAG_09059
Allomyces macrogynus
AMAG_09059
I
AMAG_11988
Allomyces macrogynus
AMAG_11988
I
AMSG_01638
Thecamonas trahens
AMSG_01638
I
AMSG_02004
Thecamonas trahens
AMSG_02004
I
AMSG_11017
Thecamonas trahens
AMSG_11017
N
AMTR_s00040p00209530
Amborella trichopoda
AMTR_s00040p00209530
I
AMTR_s00069p00068180
Amborella trichopoda
AMTR_s00069p00068180
I
AMTR_s00069p00130920
Amborella trichopoda
AMTR_s00069p00130920
I
ANCCAN_00795
Ancylostoma caninum
ANCCAN_00795
I
ANCCEY_01944
Ancylostoma ceylanicum
ANCCEY_01944
I
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
ASU_10106
Ascaris suum
ASU_10106
I
AT-HSFA4A
Arabidopsis lyrata
fgenesh2_kg.7__2405__AT4G18880.1
I
AT-HSFB2B
Arabidopsis lyrata
scaffold_603575.1
I
AT-HSFB2B
Vitis vinifera
VIT_02s0025g04170
I
AT-HSFB3
Vitis vinifera
VIT_08s0007g08750
I
BGIOSGA016941
Oryza indica
BGIOSGA016941
I
BGIOSGA026537
Oryza indica
BGIOSGA026537
I
BGIOSGA029403
Oryza indica
BGIOSGA029403
I
Bo1g020010
Brassica oleracea
Bo1g020010
I
Bo3g045370
Brassica oleracea
Bo3g045370
I
Bo4g190160
Brassica oleracea
Bo4g190160
I
Bo9g062710
Brassica oleracea
Bo9g062710
I
Bo9g181780
Brassica oleracea
Bo9g181780
I
Bostr.0556s0470
Boechera stricta
Bostr.0556s0470
I
Bostr.25463s0156
Boechera stricta
Bostr.25463s0156
I
Bostr.26959s0010
Boechera stricta
Bostr.26959s0010
I
Bostr.30275s0365
Boechera stricta
Bostr.30275s0365
I
Bostr.3359s0057
Boechera stricta
Bostr.3359s0057
I
Bra002882
Brassica rapa
Bra002882
I
Bra009515
Brassica rapa
Bra009515
I
Bra013358
Brassica rapa
Bra013358
I
Bra013406
Brassica rapa
Bra013406
I
Bra016996
Brassica rapa
Bra016996
I
Bra016998
Brassica rapa
Bra016998
I
Bra017595
Brassica rapa
Bra017595
I
Bra022949
Brassica rapa
Bra022949
I
Bra030021
Brassica rapa
Bra030021
I
Bra040968
Brassica rapa
Bra040968
I
BRADI4G35780
Brachypodium distachyon
BRADI4G35780
I
BXY_0882000
Bursaphelenchus xylophilus
BXY_0882000
I
Cagra.0796s0014
Capsella grandiflora
Cagra.0796s0014
I
Cagra.13025s0006
Capsella grandiflora
Cagra.13025s0006
I
Cagra.1912s0005
Capsella grandiflora
Cagra.1912s0005
I
Cagra.4306s0004
Capsella grandiflora
Cagra.4306s0004
I
CAOG_06646
Capsaspora owczarzaki
CAOG_06646
I
Carubv10001204m.g
Capsella rubella
Carubv10001204m.g
I
Carubv10004953m.g
Capsella rubella
Carubv10004953m.g
I
Carubv10024599m.g
Capsella rubella
Carubv10024599m.g
I
Carubv10026722m.g
Capsella rubella
Carubv10026722m.g
I
Carubv10027643m.g
Capsella rubella
Carubv10027643m.g
I
cassava14443.m1
Manihot esculenta
cassava14443.m1
I
cassava24811.valid.m1
Manihot esculenta
cassava24811.valid.m1
I
cassava43059.valid.m1
Manihot esculenta
cassava43059.valid.m1
I
cassava7014.valid.m1
Manihot esculenta
cassava7014.valid.m1
I
Ca_02416
Cicer arietinum
Ca_02416
I
Ca_08627
Cicer arietinum
Ca_08627
I
CGI_10007406
Crassostrea gigas
CGI_10007406
I
CHLREDRAFT_117914
Chlamydomonas reinhardtii
CHLREDRAFT_117914
I
chr2.CM0304.780.nc
Lotus japonicus
chr2.CM0304.780.nc
I
chr5.CM0359.140.nc
Lotus japonicus
chr5.CM0359.140.nc
I
Ciclev10011531m.g
Citrus clementina
Ciclev10011531m.g
I
Cla011664
Citrullus lanatus
Cla011664
I
DICVIV_08378
Dictyocaulus viviparus
DICVIV_08378
I
DME_0000290701
Dracunculus medinensis
DME_0000290701
I
E5Q_05471
Mixia osmundae
E5Q_05471
I
EDI_167800
Entamoeba dispar
EDI_167800
I
EHI_049510
Entamoeba histolytica
EHI_049510
I
EIN_310700
Entamoeba invadens
EIN_310700
I
ENSAMEG00000017238
Ailuropoda melanoleuca
ENSAMEG00000017238
I
ENSBTAP00000004568-D1
Bos grunniens
ENSBTAP00000004568-D1
I
ENSCSAG00000003768
Chlorocebus sabaeus
ENSCSAG00000003768
I
ENSMPUG00000005418
Mustela putorius furo
ENSMPUG00000005418
I
ENSNLEG00000004338
Nomascus leucogenys
ENSNLEG00000004338
I
ENSOARG00000002740
Ovis aries
ENSOARG00000002740
I
ENSPANG00000005017
Papio anubis
ENSPANG00000005017
I
ENSPPYG00000007441
Pongo abelii
ENSPPYG00000007441
I
ENSSTOG00000027009
Ictidomys tridecemlineatus
ENSSTOG00000027009
I
estExt_fgenesh2_pg.C_250112
Monosiga brevicollis
estExt_fgenesh2_pg.C_250112
I
Eucgr.A02338
Eucalyptus grandis
Eucgr.A02338
I
Eucgr.E02813
Eucalyptus grandis
Eucgr.E02813
I
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
evm.TU.supercontig_124.4
Carica papaya
evm.TU.supercontig_124.4
I
evm.TU.supercontig_74.64
Carica papaya
evm.TU.supercontig_74.64
I
e_gw1.1.2474.1
Mucor circinelloides
e_gw1.1.2474.1
I
e_gw1.6.1274.1
Mucor circinelloides
e_gw1.6.1274.1
I
fgenesh1_pg.C_scaffold_7000870
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7000870
I
fgenesh1_pg.C_scaffold_8000068
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_8000068
I
gene23802-v1.0-hybrid
Fragaria vesca
gene23802-v1.0-hybrid
I
gene32416-v1.0-hybrid
Fragaria vesca
gene32416-v1.0-hybrid
I
GLYMA01G42640
Glycine max
GLYMA01G42640
I
GLYMA05G29470
Glycine max
GLYMA05G29470
I
GLYMA09G26510
Glycine max
GLYMA09G26510
I
GLYMA10G07620
Glycine max
GLYMA10G07620
I
GLYMA11G02800
Glycine max
GLYMA11G02800
I
GLYMA13G21490
Glycine max
GLYMA13G21490
I
GLYMA16G32070
Glycine max
GLYMA16G32070
I
GMDG_04555
Pseudogymnoascus destructans
GMDG_04555
I
Gorai.007G010900
Gossypium raimondii
Gorai.007G010900
I
Gorai.008G244400
Gossypium raimondii
Gorai.008G244400
I
Gorai.010G240800
Gossypium raimondii
Gorai.010G240800
I
Gorai.011G036400
Gossypium raimondii
Gorai.011G036400
I
Gorai.012G044200
Gossypium raimondii
Gorai.012G044200
I
GRMZM2G098696
Zea mays
GRMZM2G098696
I
GRMZM2G164909
Zea mays
GRMZM2G164909
I
GRMZM2G165272
Zea mays
GRMZM2G165272
I
GRMZM2G301485
Zea mays
GRMZM2G301485
I
GSMUA_Achr3G31860_001
Musa acuminata
GSMUA_Achr3G31860_001
I
GSMUA_Achr4G10060_001
Musa acuminata
GSMUA_Achr4G10060_001
I
GSMUA_Achr4G19760_001
Musa acuminata
GSMUA_Achr4G19760_001
I
GSMUA_Achr4G29100_001
Musa acuminata
GSMUA_Achr4G29100_001
I
GSMUA_Achr7G13040_001
Musa acuminata
GSMUA_Achr7G13040_001
I
gw1.207.102.1
Physcomitrella patens
gw1.207.102.1
I
gw1.24.267.1
Chlorella NC64A
gw1.24.267.1
I
HCOI00423400
Haemonchus contortus
HCOI00423400
I
HCOI00424600
Haemonchus contortus
HCOI00424600
I
HSF1
Anolis carolinensis
ENSACAG00000012604
I
HSF4
Bos taurus
ENSBTAG00000003514
I
HSF4
Canis familiaris
ENSCAFG00000020379
I
HSF4
Cavia porcellus
ENSCPOG00000010834
I
HSF4
Dasypus novemcinctus
ENSDNOG00000032363
I
Hsf4
Dipodomys ordii
ENSDORG00000015128
I
HSF4
Equus caballus
ENSECAG00000016708
I
HSF4
Felis catus
ENSFCAG00000014099
I
HSF4
Homo sapiens
ENSG00000102878
D
HSF4
Gorilla gorilla
ENSGGOG00000011899
I
HSF4
Loxodonta africana
ENSLAFG00000021984
I
HSF4
Microcebus murinus
ENSMICG00000007714
I
HSF4
Myotis lucifugus
ENSMLUG00000011083
I
HSF4
Macaca mulatta
ENSMMUG00000005906
I
Hsf4
Mus musculus
ENSMUSG00000033249
I
HSF4
Oryctolagus cuniculus
ENSOCUG00000010001
I
HSF4
Otolemur garnettii
ENSOGAG00000001391
I
HSF4
Ochotona princeps
ENSOPRG00000015074
I
HSF4
Procavia capensis
ENSPCAG00000013012
I
HSF4
Pan troglodytes
ENSPTRG00000034007
I
HSF4
Pteropus vampyrus
ENSPVAG00000000402
I
Hsf4
Rattus norvegicus
ENSRNOG00000015253
I
HSF4
Sus scrofa
ENSSSCG00000002792
I
HSF4
Tursiops truncatus
ENSTTRG00000010241
I
HSFA4A
Arabidopsis thaliana
AT4G18880
D
HSFB2A
Oryza sativa
OS04G0568700
I
HSFB2B
Arabidopsis thaliana
AT4G11660
D
HSFB2B
Oryza sativa
OS08G0546800
I
HSFB2C
Oryza sativa
OS09G0526600
I
J056_002394
Wallemia ichthyophaga
J056_002394
I
LOAG_08901
Loa loa
LOAG_08901
I
LPERR04G18020
Leersia perrieri
LPERR04G18020
I
LPERR08G19290
Leersia perrieri
LPERR08G19290
I
LPERR09G13100
Leersia perrieri
LPERR09G13100
I
Lus10008007.g
Linum usitatissimum
Lus10008007.g
I
Lus10024508.g
Linum usitatissimum
Lus10024508.g
I
MDP0000127499
Malus domestica
MDP0000127499
I
mgf002110m
Mimulus guttatus
mgf002110m
I
mgf006947m
Mimulus guttatus
mgf006947m
I
mgf014237m
Mimulus guttatus
mgf014237m
I
MTR_7g091370
Medicago truncatula
MTR_7g091370
I
MTR_8g087540
Medicago truncatula
MTR_8g087540
I
MVLG_00322
Microbotryum violaceum
MVLG_00322
I
NBR_0001979501
Nippostrongylus brasiliensis
NBR_0001979501
I
O9G_004185
Rozella allomycis
O9G_004185
I
OB04G29050
Oryza brachyantha
OB04G29050
I
OB08G29340
Oryza brachyantha
OB08G29340
I
OBART04G22030
Oryza barthii
OBART04G22030
I
OBART08G22550
Oryza barthii
OBART08G22550
I
OGLUM04G22060
Oryza glumaepatula
OGLUM04G22060
I
OGLUM08G23900
Oryza glumaepatula
OGLUM08G23900
I
OGLUM09G17660
Oryza glumaepatula
OGLUM09G17660
I
OLONG_012454
Oryza longistaminata
OLONG_012454
I
OMERI04G18580
Oryza meridionalis
OMERI04G18580
I
OMERI08G17470
Oryza meridionalis
OMERI08G17470
I
OMERI09G12670
Oryza meridionalis
OMERI09G12670
I
ONIVA04G20610
Oryza nivara
ONIVA04G20610
I
ONIVA08G25630
Oryza nivara
ONIVA08G25630
I
ONIVA09G18150
Oryza nivara
ONIVA09G18150
I
OPUNC04G19790
Oryza punctata
OPUNC04G19790
I
OPUNC08G20670
Oryza punctata
OPUNC08G20670
I
OPUNC09G15460
Oryza punctata
OPUNC09G15460
I
ORGLA04G0190900
Oryza glaberrima
ORGLA04G0190900
I
ORGLA08G0219000
Oryza glaberrima
ORGLA08G0219000
I
ORUFI04G23680
Oryza rufipogon
ORUFI04G23680
I
ORUFI08G25100
Oryza rufipogon
ORUFI08G25100
I
ORUFI09G18440
Oryza rufipogon
ORUFI09G18440
I
Pavir.Ba01265
Panicum virgatum
Pavir.Ba01265
I
Pavir.Ga00998
Panicum virgatum
Pavir.Ga00998
I
Pavir.J03297
Panicum virgatum
Pavir.J03297
I
PFL1_06413
Pseudozyma flocculosa
PFL1_06413
I
PGSC0003DMG400003053
Solanum tuberosum
PGSC0003DMG400003053
I
PGSC0003DMG400012105
Solanum tuberosum
PGSC0003DMG400012105
I
PGSC0003DMG401027812
Solanum tuberosum
PGSC0003DMG401027812
I
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
PHSY_005227
Pseudozyma hubeiensis
PHSY_005227
I
PHUM177250
Pediculus humanus
PHUM177250
I
PIIN_01911
Piriformospora indica
PIIN_01911
I
PK09831.1
Cannabis sativa
PK09831.1
I
PK17549.1
Cannabis sativa
PK17549.1
I
Pm023788
Prunus mume
Pm023788
I
POPTR_0001s08990
Populus trichocarpa
POPTR_0001s08990
I
POPTR_0006s11680
Populus trichocarpa
POPTR_0006s11680
I
POPTR_0011s06820
Populus trichocarpa
POPTR_0011s06820
I
POPTR_0016s05680
Populus trichocarpa
POPTR_0016s05680
I
PRUPE_ppa008441mg
Prunus persica
PRUPE_ppa008441mg
I
PSEUBRA_SCAF6g00904
Pseudozyma brasiliensis
PSEUBRA_SCAF6g00904
I
PTSG_11973
Salpingoeca rosetta
PTSG_11973
I
RO3G_03272
Rhizopus oryzae
RO3G_03272
I
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
SapurV1A.0029s0230
Salix purpurea
SapurV1A.0029s0230
I
SapurV1A.0181s0030
Salix purpurea
SapurV1A.0181s0030
I
SapurV1A.0208s0230
Salix purpurea
SapurV1A.0208s0230
I
SapurV1A.0507s0120
Salix purpurea
SapurV1A.0507s0120
I
SapurV1A.3884s0010
Salix purpurea
SapurV1A.3884s0010
I
Sb02g030490
Sorghum bicolor
Sb02g030490
I
Sb06g025710
Sorghum bicolor
Sb06g025710
I
scaffold_702717.1
Arabidopsis lyrata
scaffold_702717.1
I
Si030094m.g
Setaria italica
Si030094m.g
I
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
Solyc03g006000.2
Solanum lycopersicum
Solyc03g006000.2
I
Solyc03g026020.2
Solanum lycopersicum
Solyc03g026020.2
I
Solyc08g080540.2
Solanum lycopersicum
Solyc08g080540.2
I
Solyc09g009100.2
Solanum lycopersicum
Solyc09g009100.2
I
SPAL_0001635100
Strongyloides papillosus
SPAL_0001635100
I
sr14110
Sporisorium reilianum
sr14110
I
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
SVUK_0000175201
Strongylus vulgaris
SVUK_0000175201
I
TCM_016198
Theobroma cacao
TCM_016198
I
TCM_029630
Theobroma cacao
TCM_029630
I
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I
Thhalv10025409m.g
Eutrema salsugineum
Thhalv10025409m.g
I
Thhalv10028744m.g
Eutrema salsugineum
Thhalv10028744m.g
I
Traes_5BL_FCB1625F3
Triticum aestivum
Traes_5BL_FCB1625F3
I
UHOR_04781
Ustilago hordei
UHOR_04781
I
UM03053
Ustilago maydis
UM03053
I
V499_02686
Pseudogymnoascus pannorum
V499_02686
I
VIT_10s0003g01770
Vitis vinifera
VIT_10s0003g01770
I
XP_002155719.1
Hydra magnipapillata
XP_002155719.1
I