Bostr.6251s0027 (Boechera stricta)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Bostr.6251s0027 T173896_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFDP1
M08108_2.00 		Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN		 ChIP-seq
Mathelier et al.(2014)
MA1122.1 		0.603 0.603
TFDP1
M09035_2.00 		Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB		 Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C 		0.603 0.603
dpl-1
M09525_2.00 		Caenorhabditis elegans
GCGCGYHW
WDRCGCGC		 Misc
Heinz et al.(2010)
cElegans-Adult_modEncode 		0.588 0.588
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.6251s0027.1.p E2F 48 131

Links

Other E2F family TFs
Other Boechera stricta TFs

531 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001078 Ricinus communis 29646.m001078 N 0.000
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.000
Ca_02482 Cicer arietinum Ca_02482 N 0.000
Ca_19863 Cicer arietinum Ca_19863 N 0.000
Cla013743 Citrullus lanatus Cla013743 I 0.000
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.000
Eucgr.K01103 Eucalyptus grandis Eucgr.K01103 N 0.000
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.000
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.000
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.000
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.000
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.000
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.000
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.000
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
Lus10038306.g Linum usitatissimum Lus10038306.g N 0.000
MTR_2g091190 Medicago truncatula MTR_2g091190 N 0.000
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.000
OB03G21490 Oryza brachyantha OB03G21490 I 0.000
OBART03G11320 Oryza barthii OBART03G11320 I 0.000
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.000
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.000
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.000
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.000
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.000
OS03G0260600 Oryza sativa OS03G0260600 I 0.000
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.000
PDK_20s1551661g004 Phoenix dactylifera PDK_20s1551661g004 N 0.000
PK25264.1 Cannabis sativa PK25264.1 N 0.000
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.000
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.000
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.000
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.000
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.000
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.000
Si039730m.g Setaria italica Si039730m.g I 0.000
TCM_001690 Theobroma cacao TCM_001690 N 0.000
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.000