CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Contig8006.0.0.g35
(
Oxytricha trifallax
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02319 (E2F_TDP)
IPR003316
Contig8006.0.0.g35
T174045_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dpl-1
M09525_2.00
Caenorhabditis elegans
GCGCGYHW
WDRCGCGC
Misc
Heinz et al.(2010)
cElegans-Adult_modEncode
0.478
0.478
TFDP1
M08108_2.00
Homo sapiens
NSGCGGGAAVN
NBTTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA1122.1
0.433
0.433
TFDP1
M09035_2.00
Homo sapiens
VRDDGGCGGGAMDN
NHKTCCCGCCHHYB
Misc
Kulakovskiy et al.(2013)
TFDP1_HUMAN.H11MO.0.C
0.433
0.433
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Contig8006.0.0.g35
E2F
129
205
KDKKLVFLSKSVLQKIKEKPMTTGTQIANEILELYKQFQDVNQKVDFKNVQRRVYDALNVLNAMDIIRKDKNQIFFN
Links
Other
E2F
family TFs
Other
Oxytricha trifallax
TFs
433 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
21608_YPL177C
Saccharomyces mikatae
21608_YPL177C
I
0.000
22207_YPL177C
Saccharomyces paradoxus
22207_YPL177C
I
0.000
24630_YPL177C
Saccharomyces bayanus
24630_YPL177C
I
0.000
8079_YGL096W
Saccharomyces bayanus
8079_YGL096W
I
0.000
8695_YGL096W
Saccharomyces paradoxus
8695_YGL096W
I
0.000
AACERI_AaceriAFL049C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL049C
I
0.000
AAEL014550
Aedes aegypti
AAEL014550
I
0.000
ADAC004901
Anopheles darlingi
ADAC004901
I
0.000
AGOS_AFL049C
Ashbya gossypii
AGOS_AFL049C
I
0.000
AUEXF2481DRAFT_26059
Aureobasidium subglaciale
AUEXF2481DRAFT_26059
I
0.000
BAUCODRAFT_212345
Baudoinia compniacensis
BAUCODRAFT_212345
I
0.000
CAGL0C01551g
Candida glabrata
CAGL0C01551g
I
0.000
CAOG_08013
Capsaspora owczarzaki
CAOG_08013
I
0.000
CUP9
Saccharomyces cerevisiae
YPL177C
D
0.000
DI09_143p10
Microsporidia sp
DI09_143p10
I
0.000
DOTSEDRAFT_23295
Dothistroma septosporum
DOTSEDRAFT_23295
I
0.000
Ecym_2247
Eremothecium cymbalariae
Ecym_2247
I
0.000
ENSETEG00000011891
Echinops telfairi
ENSETEG00000011891
I
0.000
ENSPVAG00000016033
Pteropus vampyrus
ENSPVAG00000016033
I
0.000
fgenesh1_pg.C_chr_3000478
Mycosphaerella graminicola
fgenesh1_pg.C_chr_3000478
I
0.000
HPODL_01870
Ogataea parapolymorpha
HPODL_01870
I
0.000
KAFR_0A04370
Kazachstania africana
KAFR_0A04370
I
0.000
KLLA0_B10450g
Kluyveromyces lactis
KLLA0_B10450g
I
0.000
KNAG_0F02210
Kazachstania naganishii
KNAG_0F02210
I
0.000
KNAG_0M00500
Kazachstania naganishii
KNAG_0M00500
I
0.000
Kpol_1036p56
Vanderwaltozyma polyspora
Kpol_1036p56
I
0.000
KUCA_T00004797001
Kuraishia capsulata
KUCA_T00004797001
I
0.000
M437DRAFT_13662
Aureobasidium melanogenum
M437DRAFT_13662
I
0.000
M438DRAFT_396225
Aureobasidium pullulans
M438DRAFT_396225
I
0.000
Mycgr3G91768
Zymoseptoria tritici
Mycgr3G91768
I
0.000
NCAS_0H01130
Naumovozyma castellii
NCAS_0H01130
I
0.000
NDAI_0F02170
Naumovozyma dairenensis
NDAI_0F02170
I
0.000
NDAI_0I01320
Naumovozyma dairenensis
NDAI_0I01320
I
0.000
nRc.2.0.1.g06302
Romanomermis culicivorax
nRc.2.0.1.g06302
I
0.000
O9G_002924
Rozella allomycis
O9G_002924
I
0.000
PAS_chr3_0590
Komagataella pastoris
PAS_chr3_0590
I
0.000
PTSG_05211
Salpingoeca rosetta
PTSG_05211
I
0.000
Scas_Contig597.15
Saccharomyces castellii
Scas_Contig597.15
I
0.000
SEPMUDRAFT_148705
Sphaerulina musiva
SEPMUDRAFT_148705
I
0.000
SKUD_191904
Saccharomyces kudriavzevii
SKUD_191904
I
0.000
SU7_3505
Saccharomyces arboricola
SU7_3505
I
0.000
TBLA_0C03740
Tetrapisispora blattae
TBLA_0C03740
I
0.000
TDEL_0F01810
Torulaspora delbrueckii
TDEL_0F01810
I
0.000
TOS8
Saccharomyces cerevisiae
YGL096W
D
0.000
TPHA_0B02580
Tetrapisispora phaffii
TPHA_0B02580
I
0.000
XP_002492817.1
Pichia pastoris
XP_002492817.1
I
0.000
ZBAI_04266
Zygosaccharomyces bailii
ZBAI_04266
I
0.000
ZBAI_07775
Zygosaccharomyces bailii
ZBAI_07775
I
0.000
ZYRO0G22044g
Zygosaccharomyces rouxii
ZYRO0G22044g
I
0.000