CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM12G07580
(
Oryza glumaepatula
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03101 (FAR1)
IPR004330
OGLUM12G07580
T179882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G07580.1
FAR1
104
197
MFYNEYARWLGFPFRVGRSRRSKGMEEVVIMKRFVCSREGAHKKKQPSTSGEATSKRERASMREGCNAMMEVVRDKDHWVVSKLEKAHNHSLGI
OGLUM12G07580.2
FAR1
104
197
MFYNEYARWLGFPFRVGRSRRSKGMEEVVIMKRFVCSREGAHKKKQPSTSGEATSKRERASMREGCNAMMEVVRDKDHWVVSKLEKAHNHSLGI
Links
Other
FAR1
family TFs
Other
Oryza glumaepatula
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036435
Oryza indica
BGIOSGA036435
N
1.000
BRADI4G40020
Brachypodium distachyon
BRADI4G40020
N
0.798
MLOC_38921
Hordeum vulgare
MLOC_38921
N
0.809
OB12G16010
Oryza brachyantha
OB12G16010
N
0.888
ONIVA12G05970
Oryza nivara
ONIVA12G05970
N
1.000
OPUNC12G06140
Oryza punctata
OPUNC12G06140
N
0.978
ORGLA12G0060700
Oryza glaberrima
ORGLA12G0060700
N
1.000
OS12G0225300
Oryza sativa
OS12G0225300
N
1.000
Pavir.Cb01881
Panicum virgatum
Pavir.Cb01881
N
0.831
Pavir.J33683
Panicum virgatum
Pavir.J33683
N
0.831
Sb08g001435
Sorghum bicolor
Sb08g001435
N
0.831
Traes_5AS_1986BD81F
Triticum aestivum
Traes_5AS_1986BD81F
N
0.798
Traes_5DS_61EE28B2A
Triticum aestivum
Traes_5DS_61EE28B2A
N
0.787
TRIUR3_17567
Triticum urartu
TRIUR3_17567
N
0.798