cassava25471.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava25471.m1 T181041_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25471.m1 FAR1 63 157

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.956
29889.m003255 Ricinus communis 29889.m003255 N 0.700
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.911
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.767
Bo5g010680 Brassica oleracea Bo5g010680 N 0.867
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.878
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.811
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.878
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.878
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.700
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.911
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.700
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.922
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.922
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.889
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.700
FRS11 Arabidopsis thaliana AT1G10240 N 0.878
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.722
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.889
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.711
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.933
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.700
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.900
MDP0000233216 Malus domestica MDP0000233216 N 0.711
MDP0000234814 Malus domestica MDP0000234814 N 0.865
MDP0000786741 Malus domestica MDP0000786741 N 0.711
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.789
OB04G20960 Oryza brachyantha OB04G20960 N 0.800
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.700
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.900
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.767
OS04G0443000 Oryza sativa OS04G0443000 N 0.767
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.711
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.878
PK06148.1 Cannabis sativa PK06148.1 N 0.911
PK12746.1 Cannabis sativa PK12746.1 N 0.711
Pm003854 Prunus mume Pm003854 N 0.911
Pm008290 Prunus mume Pm008290 N 0.711
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.700
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.944
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.711
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.911
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.700
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.944
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.778
Si012297m.g Setaria italica Si012297m.g N 0.756
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.911
TCM_041141 Theobroma cacao TCM_041141 N 0.900
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.867
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.778
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.789
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.778
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.700
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.700
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.933