MDP0000233216 (Malus domestica)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 MDP0000233216 T181557_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000233216 FAR1 53 147

Links

Other FAR1 family TFs
Other Malus domestica TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.733
29889.m003255 Ricinus communis 29889.m003255 N 0.978
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.722
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.933
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.744
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.711
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.933
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.722
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.944
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.711
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.722
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.911
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.922
FRS11 Arabidopsis thaliana AT1G10240 N 0.700
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.944
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.711
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.944
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.722
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.933
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.956
MDP0000786741 Malus domestica MDP0000786741 N 1.000
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.722
OB04G20960 Oryza brachyantha OB04G20960 N 0.700
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.944
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.722
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.911
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.878
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.711
PK06148.1 Cannabis sativa PK06148.1 N 0.722
PK12746.1 Cannabis sativa PK12746.1 N 0.944
Pm003854 Prunus mume Pm003854 N 0.733
Pm008290 Prunus mume Pm008290 N 1.000
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.922
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.733
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.944
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 1.000
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.733
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.933
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.733
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.700
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.722
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.911
TCM_021310 Theobroma cacao TCM_021310 N 0.944
TCM_041141 Theobroma cacao TCM_041141 N 0.722
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.722
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.722
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.722
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.967
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.944
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.722