CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FOXP1
(
Echinops telfairi
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSETEG00000017197
T185691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN
NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.827
1.000
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA
TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.827
1.000
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA
TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.827
1.000
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN
NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.827
1.000
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.827
1.000
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.827
1.000
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM
KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.827
1.000
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.827
1.000
FOXP1
M10536_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.827
1.000
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.827
1.000
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.751
0.901
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.751
0.901
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.751
0.901
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.751
0.901
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.751
0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.745
0.765
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA
TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.745
0.765
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.745
0.765
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.745
0.765
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.679
0.469
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.679
0.469
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.679
0.469
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.679
0.469
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.679
0.469
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.679
0.469
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.679
0.469
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.678
0.469
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.678
0.469
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.678
0.469
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.678
0.469
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.678
0.469
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.678
0.469
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.678
0.469
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.678
0.469
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.665
0.457
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.665
0.432
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.665
0.432
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.665
0.432
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.665
0.432
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.665
0.432
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.665
0.432
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.665
0.432
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.665
0.432
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.665
0.432
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.665
0.444
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000013959
Forkhead
464
547
RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEVEFQKRRPQK
Links
Other
Forkhead
family TFs
Other
Echinops telfairi
TFs
663 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009606
Calypte anna
Aan_R009606
I
Afo_R005157
Aptenodytes forsteri
Afo_R005157
I
Afo_R005555
Aptenodytes forsteri
Afo_R005555
I
Alligator_sinensis_CCG009102.1
Alligator sinensis
Alligator_sinensis_CCG009102.1
I
Alligator_sinensis_CCG011017.1
Alligator sinensis
Alligator_sinensis_CCG011017.1
I
Aqu1.218726
Amphimedon queenslandica
Aqu1.218726
I
Brh_R005579
Buceros rhinoceros
Brh_R005579
I
Brh_R011837
Buceros rhinoceros
Brh_R011837
I
CapteG182542
Capitella teleta
CapteG182542
I
CapteG228069
Capitella teleta
CapteG228069
I
CGI_10018323
Crassostrea gigas
CGI_10018323
I
Cmyd_10005434
Chelonia mydas
Cmyd_10005434
I
ENSAMEG00000009592
Ailuropoda melanoleuca
ENSAMEG00000009592
I
ENSAMEG00000011612
Ailuropoda melanoleuca
ENSAMEG00000011612
I
ENSAMXG00000011237
Astyanax mexicanus
ENSAMXG00000011237
I
ENSAMXG00000018013
Astyanax mexicanus
ENSAMXG00000018013
I
ENSAPLG00000003195
Anas platyrhynchos
ENSAPLG00000003195
I
ENSAPLG00000007121
Anas platyrhynchos
ENSAPLG00000007121
I
ENSCAFG00000032212
Canis familiaris
ENSCAFG00000032212
I
ENSCPOG00000000704
Cavia porcellus
ENSCPOG00000000704
I
ENSCSAG00000001134
Chlorocebus sabaeus
ENSCSAG00000001134
I
ENSCSAG00000013410
Chlorocebus sabaeus
ENSCSAG00000013410
I
ENSCSAG00000016312
Chlorocebus sabaeus
ENSCSAG00000016312
I
ENSDORG00000009001
Dipodomys ordii
ENSDORG00000009001
I
ENSFALG00000000542
Ficedula albicollis
ENSFALG00000000542
I
ENSFALG00000008605
Ficedula albicollis
ENSFALG00000008605
I
ENSFALG00000011461
Ficedula albicollis
ENSFALG00000011461
I
ENSGALG00000021593
Gallus gallus
ENSGALG00000021593
I
ENSGMOG00000011084
Gadus morhua
ENSGMOG00000011084
I
ENSGMOG00000013488
Gadus morhua
ENSGMOG00000013488
I
ENSGMOG00000017811
Gadus morhua
ENSGMOG00000017811
I
ENSLACG00000006098
Latimeria chalumnae
ENSLACG00000006098
I
ENSLACG00000012215
Latimeria chalumnae
ENSLACG00000012215
I
ENSLACG00000015540
Latimeria chalumnae
ENSLACG00000015540
I
ENSLOCG00000001853
Lepisosteus oculatus
ENSLOCG00000001853
I
ENSLOCG00000017268
Lepisosteus oculatus
ENSLOCG00000017268
I
ENSMEUG00000007444
Macropus eugenii
ENSMEUG00000007444
I
ENSMPUG00000001859
Mustela putorius furo
ENSMPUG00000001859
I
ENSMPUG00000014412
Mustela putorius furo
ENSMPUG00000014412
I
ENSMPUG00000014531
Mustela putorius furo
ENSMPUG00000014531
I
ENSNLEG00000002239
Nomascus leucogenys
ENSNLEG00000002239
I
ENSNLEG00000013972
Nomascus leucogenys
ENSNLEG00000013972
I
ENSOANG00000022119
Ornithorhynchus anatinus
ENSOANG00000022119
I
ENSOARG00000007915
Ovis aries
ENSOARG00000007915
I
ENSOARG00000008063
Ovis aries
ENSOARG00000008063
I
ENSOARG00000020088
Ovis aries
ENSOARG00000020088
I
ENSOCUG00000029649
Oryctolagus cuniculus
ENSOCUG00000029649
I
ENSONIG00000003087
Oreochromis niloticus
ENSONIG00000003087
I
ENSONIG00000004726
Oreochromis niloticus
ENSONIG00000004726
I
ENSONIG00000018772
Oreochromis niloticus
ENSONIG00000018772
I
ENSP00000357348
Macaca fascicularis
ENSP00000357348
I
ENSP00000357348-D1
Bos grunniens
ENSP00000357348-D1
I
ENSP00000361943
Macaca fascicularis
ENSP00000361943
I
ENSP00000361943-D1
Bos grunniens
ENSP00000361943-D1
I
ENSPANG00000006227
Papio anubis
ENSPANG00000006227
I
ENSPANG00000018687
Papio anubis
ENSPANG00000018687
I
ENSPFOG00000001913
Poecilia formosa
ENSPFOG00000001913
I
ENSPFOG00000015536
Poecilia formosa
ENSPFOG00000015536
I
ENSPPYG00000001505
Pongo abelii
ENSPPYG00000001505
I
ENSPPYG00000016987
Pongo abelii
ENSPPYG00000016987
I
ENSPPYG00000018693
Pongo abelii
ENSPPYG00000018693
I
ENSPSIG00000003791
Pelodiscus sinensis
ENSPSIG00000003791
I
ENSPSIG00000012495
Pelodiscus sinensis
ENSPSIG00000012495
I
ENSSHAG00000016487
Sarcophilus harrisii
ENSSHAG00000016487
I
ENSSHAG00000017958
Sarcophilus harrisii
ENSSHAG00000017958
I
ENSSHAG00000018213
Sarcophilus harrisii
ENSSHAG00000018213
I
ENSSSCG00000024651
Sus scrofa
ENSSSCG00000024651
I
ENSSTOG00000022371
Ictidomys tridecemlineatus
ENSSTOG00000022371
I
ENSSTOG00000023191
Ictidomys tridecemlineatus
ENSSTOG00000023191
I
ENSXMAG00000006950
Xiphophorus maculatus
ENSXMAG00000006950
I
ENSXMAG00000014241
Xiphophorus maculatus
ENSXMAG00000014241
I
estExt_GenewiseH_1.C_4620016
Branchiostoma floridae
estExt_GenewiseH_1.C_4620016
I
Gfo_R007552
Geospiza fortis
Gfo_R007552
I
Gfo_R016187
Geospiza fortis
Gfo_R016187
I
HEY1
Bos taurus
ENSBTAG00000015717
I
HEY1
Canis familiaris
ENSCAFG00000008391
I
HEY1
Cavia porcellus
ENSCPOG00000008527
I
hey1
Danio rerio
ENSDARG00000070538
I
HEY1
Dasypus novemcinctus
ENSDNOG00000031981
I
HEY1
Equus caballus
ENSECAG00000017010
I
HEY1
Felis catus
ENSFCAG00000025542
I
HEY1
Homo sapiens
ENSG00000164683
D
hey1
Gasterosteus aculeatus
ENSGACG00000003436
I
HEY1
Gasterosteus aculeatus
ENSGACG00000008712
I
HEY1
Gorilla gorilla
ENSGGOG00000009960
I
HEY1
Loxodonta africana
ENSLAFG00000011488
I
HEY1
Monodelphis domestica
ENSMODG00000006648
I
Hey1
Mus musculus
ENSMUSG00000040289
I
HEY1
Otolemur garnettii
ENSOGAG00000007210
I
HEY1
Oryzias latipes
ENSORLG00000008268
I
Hey1
Rattus norvegicus
ENSRNOG00000011593
I
HEY1
Sus scrofa
ENSSSCG00000006159
I
hey1
Tetraodon nigroviridis
ENSTNIG00000017785
I
HEY1
Tetraodon nigroviridis
ENSTNIG00000018401
I
HEY1
Takifugu rubripes
ENSTRUG00000013573
I
hey1
Takifugu rubripes
ENSTRUG00000014561
I
hey1
Xenopus tropicalis
XB-GENE-486694
I
hey1.S
Xenopus laevis
XB-GENE-865637
I
HEY2
Anolis carolinensis
ENSACAG00000001813
I
HEY2
Bos taurus
ENSBTAG00000000919
I
HEY2
Callithrix jacchus
ENSCJAG00000003761
I
HEY2
Cavia porcellus
ENSCPOG00000021417
I
hey2
Danio rerio
ENSDARG00000013441
I
HEY2
Dasypus novemcinctus
ENSDNOG00000044967
I
HEY2
Equus caballus
ENSECAG00000014094
I
HEY2
Erinaceus europaeus
ENSEEUG00000014040
I
HEY2
Echinops telfairi
ENSETEG00000007340
I
HEY2
Felis catus
ENSFCAG00000026914
I
HEY2
Homo sapiens
ENSG00000135547
D
HEY2
Loxodonta africana
ENSLAFG00000014208
I
HEY2
Meleagris gallopavo
ENSMGAG00000013281
I
HEY2
Myotis lucifugus
ENSMLUG00000002617
I
HEY2
Macaca mulatta
ENSMMUG00000009491
I
HEY2
Monodelphis domestica
ENSMODG00000017701
I
Hey2
Mus musculus
ENSMUSG00000019789
D
HEY2
Otolemur garnettii
ENSOGAG00000027812
I
HEY2
Pan troglodytes
ENSPTRG00000018574
I
Hey2
Rattus norvegicus
ENSRNOG00000013364
I
HEY2
Sorex araneus
ENSSARG00000011755
I
HEY2
Sus scrofa
ENSSSCG00000004223
I
HEY2
Tupaia belangeri
ENSTBEG00000008836
I
HEY2
Taeniopygia guttata
ENSTGUG00000011792
I
HEY2
Vicugna pacos
ENSVPAG00000010498
I
hey2
Xenopus tropicalis
XB-GENE-485923
I
HEYL
Bos taurus
ENSBTAG00000008688
I
heyl
Danio rerio
ENSDARG00000055798
I
HEYL
Dasypus novemcinctus
ENSDNOG00000010392
I
HEYL
Equus caballus
ENSECAG00000007220
I
HEYL
Felis catus
ENSFCAG00000010963
I
HEYL
Homo sapiens
ENSG00000163909
I
heyl
Gasterosteus aculeatus
ENSGACG00000007492
I
HEYL
Gorilla gorilla
ENSGGOG00000008268
I
HEYL
Loxodonta africana
ENSLAFG00000027563
I
HEYL
Myotis lucifugus
ENSMLUG00000029490
I
HEYL
Macaca mulatta
ENSMMUG00000018861
I
Heyl
Mus musculus
ENSMUSG00000032744
I
HEYL
Ornithorhynchus anatinus
ENSOANG00000010000
I
HEYL
Oryctolagus cuniculus
ENSOCUG00000000560
I
HEYL
Otolemur garnettii
ENSOGAG00000030877
I
heyl
Oryzias latipes
ENSORLG00000013651
I
HEYL
Pan troglodytes
ENSPTRG00000000574
I
Heyl
Rattus norvegicus
ENSRNOG00000015318
I
heyl
Tetraodon nigroviridis
ENSTNIG00000009228
I
heyl
Takifugu rubripes
ENSTRUG00000003399
I
HEYL
Tursiops truncatus
ENSTTRG00000014353
I
ISCW011251
Ixodes scapularis
ISCW011251
I
L798_14068
Zootermopsis nevadensis
L798_14068
I
LDEC001043
Leptinotarsa decemlineata
LDEC001043
I
LotgiG171867
Lottia gigantea
LotgiG171867
I
Myotis_brandtii_HEY1_10021379
Myotis brandtii
Myotis_brandtii_HEY1_10021379
I
Myotis_brandtii_hey2_10035635
Myotis brandtii
Myotis_brandtii_hey2_10035635
I
Ocbimv22039104m.g
Octopus bimaculoides
Ocbimv22039104m.g
I
Ogr14041
Ophisaurus gracilis
Ogr14041
I
Ogr15033
Ophisaurus gracilis
Ogr15033
I
PABPC4
Canis familiaris
ENSCAFG00000003081
I
PHUM454530
Pediculus humanus
PHUM454530
I
Pvit_00065
Pogona vitticeps
Pvit_00065
I
Pvit_01735
Pogona vitticeps
Pvit_01735
I
Sakowv30023592m.g
Saccoglossus kowalevskii
Sakowv30023592m.g
I
SPU_009465
Strongylocentrotus purpuratus
SPU_009465
I
TC001593
Tribolium castaneum
TC001593
I
tetur01g03020
Tetranychus urticae
tetur01g03020
I
YQE_09192
Dendroctonus ponderosae
YQE_09192
I