foxp2.L (Xenopus laevis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 XB-GENE-864899 T189723_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Foxp2
M00792_2.00 		Mus musculus
RTAAACAD
HTGTTTAY		 PBM
Weirauch et al.(2013)
pTH1288 		0.829 0.988
FOXP2
M05866_2.00 		Homo sapiens
RTAAAYAWNN
NNWTRTTTAY		 SMiLE-seq
Isakova et al.(2017)
FOXP2 		0.829 0.988
FOXP2
M08116_2.00 		Homo sapiens
NDGTAAACAVN
NBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0593.1 		0.829 0.988
FOXP2
M09089_2.00 		Homo sapiens
DGTAAACAV
BTGTTTACH		 Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C 		0.829 0.988
Foxp2
M09101_2.00 		Mus musculus
NGTAAACAN
NTGTTTACN		 Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A 		0.829 0.988
FOXP1
M00836_2.00 		Homo sapiens
NRTMAACANN
NNTGTTKAYN		 PBM
Gabut et al.(2011)
pEX0123 		0.751 0.889
FOXP1
M00837_2.00 		Homo sapiens
DGTAAACAA
TTGTTTACH		 PBM
Gabut et al.(2011)
pEX0124 		0.751 0.889
FOXP1
M01976_2.00 		Homo sapiens
RTAAACAA
TTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5656 		0.751 0.889
Foxp1
M00793_2.00 		Mus musculus
NRTMAAYAN
NTRTTKAYN		 PBM
Weirauch et al.(2013)
pTH3855 		0.751 0.889
FOXP1
M04811_2.00 		Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX 		0.751 0.889
FOXP1
M08115_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 ChIP-seq
Mathelier et al.(2014)
MA0481.2 		0.751 0.889
FOXP1
M09086_2.00 		Homo sapiens
RKAAACAVM
KBTGTTTMY		 Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A 		0.751 0.889
FOXP1
M09541_2.00 		Homo sapiens
NDGTAAACAVNN
NNBTGTTTACHN		 Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006 		0.751 0.889
FOXP1
M10536_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXP1_01 		0.751 0.889
FOXP1
M04812_2.00 		Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN		 SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX 		0.751 0.889
FoxP
M03753_2.00 		Drosophila melanogaster
AAACAACAACAA
TTGTTGTTGTTT		 SELEX
Nitta et al.(2015)
CG16899_1 		0.725 0.728
FoxP
M06201_2.00 		Drosophila melanogaster
VRTAAACAA
TTGTTTAYB		 B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735 		0.725 0.728
FoxP
M06202_2.00 		Drosophila melanogaster
VNNVBBAAAAAAAD
HTTTTTTTVVBNNB		 B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905 		0.725 0.728
FoxP
M06203_2.00 		Drosophila melanogaster
NNNNNRAAAAAAWNN
NNWTTTTTTYNNNNN		 B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905 		0.725 0.728
SPU_025010
M01988_2.00 		Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN		 PBM
Weirauch et al.(2014)
pTH6641 		0.667 0.457
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI70268 Forkhead 495 579
CAI96563 Forkhead 495 579
CAI96564 Forkhead 385 469

Links

Other Forkhead family TFs
Other Xenopus laevis TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025162 Oryza indica BGIOSGA025162 I
Bo5g062580 Brassica oleracea Bo5g062580 I
Bo6g107240 Brassica oleracea Bo6g107240 I
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I
Bra032365 Brassica rapa Bra032365 I
BRC1 Vitis vinifera VIT_17s0000g04180 I
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I
Cla020670 Citrullus lanatus Cla020670 I
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I
Lus10017856.g Linum usitatissimum Lus10017856.g I
Lus10038512.g Linum usitatissimum Lus10038512.g I
Lus10042962.g Linum usitatissimum Lus10042962.g I
mgf014960m Mimulus guttatus mgf014960m I
OBART07G03380 Oryza barthii OBART07G03380 I
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I
ONIVA07G01330 Oryza nivara ONIVA07G01330 I
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I
OS07G0152000 Oryza sativa OS07G0152000 I
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I
TCP24 Arabidopsis thaliana AT1G30210 D
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I