GATA6 (Arabidopsis thaliana)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AT3G51080 T191717_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00		 Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317		 (Direct) (Direct)
GATA6
M06890_2.00		 Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.847 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.847 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.847 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.806
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.843 0.806
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.843 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.839 0.917
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.806
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.832 0.778
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.778
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.778
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.722
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.722
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01999_2.00 GATA 51 86

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G51080.1 GATA 223 258

Links

Other GATA family TFs
Other Arabidopsis thaliana TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL002902 Aedes aegypti AAEL002902 I
AALB010655 Anopheles albimanus AALB010655 I
Aan_R001044 Calypte anna Aan_R001044 I
Aan_R002857 Calypte anna Aan_R002857 I
AARA000771 Anopheles arabiensis AARA000771 I
AATE005140 Anopheles atroparvus AATE005140 I
ACEP23430 Atta cephalotes ACEP23430 I
ACHR006076 Anopheles christyi ACHR006076 I
ACOM023427 Anopheles coluzzii ACOM023427 I
ACUA022223 Anopheles culicifacies ACUA022223 I
ACYPI001448 Acyrthosiphon pisum ACYPI001448 I
ADIR004364 Anopheles dirus ADIR004364 I
AEPI000695 Anopheles epiroticus AEPI000695 I
AFAF020800 Anopheles farauti AFAF020800 I
Afo_R010658 Aptenodytes forsteri Afo_R010658 I
Afo_R013292 Aptenodytes forsteri Afo_R013292 I
AFUN009694 Anopheles funestus AFUN009694 I
AGAP011985 Anopheles gambiae AGAP011985 I
Alligator_sinensis_CCG002585.1 Alligator sinensis Alligator_sinensis_CCG002585.1 I
Alligator_sinensis_CCG005115.1 Alligator sinensis Alligator_sinensis_CCG005115.1 I
AMEC000330 Anopheles melas AMEC000330 I
AMEM016167 Anopheles merus AMEM016167 I
AMIN004405 Anopheles minimus AMIN004405 I
AQUA008654 Anopheles quadriannulatus AQUA008654 I
ASTEI05879 Anopheles stephensi ASTEI05879 I
A_07561 Schistosoma haematobium A_07561 I
BGIBMGA008990 Bombyx mori BGIBMGA008990 I
BGLB003400 Biomphalaria glabrata BGLB003400 I
BGLB010605 Biomphalaria glabrata BGLB010605 I
Brh_R012765 Buceros rhinoceros Brh_R012765 I
CapteG111042 Capitella teleta CapteG111042 I
CapteG154829 Capitella teleta CapteG154829 I
Cflo_04586--NP_001011637.1_APIME Camponotus floridanus Cflo_04586--NP_001011637.1_APIME I
CGI_10006631 Crassostrea gigas CGI_10006631 I
CGI_10013641 Crassostrea gigas CGI_10013641 I
CLEC011700 Cimex lectularius CLEC011700 I
Cmyd_10002489 Chelonia mydas Cmyd_10002489 I
Cmyd_10006750 Chelonia mydas Cmyd_10006750 I
CPIJ012827 Culex quinquefasciatus CPIJ012827 I
CPIJ012828 Culex quinquefasciatus CPIJ012828 I
CpipJ_CPIJ012827 Culex pipiens CpipJ_CPIJ012827 I
CpipJ_CPIJ012828 Culex pipiens CpipJ_CPIJ012828 I
csin110283 Clonorchis sinensis csin110283 I
D917_00468 Trichinella nativa D917_00468 I
D918_07072 Trichuris suis D918_07072 I
DAPPUDRAFT_320202 Daphnia pulex DAPPUDRAFT_320202 I
DILT_0001206901 Diphyllobothrium latum DILT_0001206901 I
ECANG7_02703 Echinococcus canadensis ECANG7_02703 I
ECPE_0000551801 Echinostoma caproni ECPE_0000551801 I
EFV58362 Trichinella spiralis EFV58362 I
EmuJ_000663800 Echinococcus multilocularis EmuJ_000663800 I
ENSACAG00000009715 Anolis carolinensis ENSACAG00000009715 I
ENSACAG00000015086 Anolis carolinensis ENSACAG00000015086 I
ENSAMEG00000008556 Ailuropoda melanoleuca ENSAMEG00000008556 I
ENSAMEG00000020165 Ailuropoda melanoleuca ENSAMEG00000020165 I
ENSAMXG00000024993 Astyanax mexicanus ENSAMXG00000024993 I
ENSAMXG00000025039 Astyanax mexicanus ENSAMXG00000025039 I
ENSAMXG00000025095 Astyanax mexicanus ENSAMXG00000025095 I
ENSAMXG00000025610 Astyanax mexicanus ENSAMXG00000025610 I
ENSAMXG00000025657 Astyanax mexicanus ENSAMXG00000025657 I
ENSAPLG00000000878 Anas platyrhynchos ENSAPLG00000000878 I
ENSAPLG00000007177 Anas platyrhynchos ENSAPLG00000007177 I
ENSCSAG00000018801 Chlorocebus sabaeus ENSCSAG00000018801 I
ENSCSAG00000019610 Chlorocebus sabaeus ENSCSAG00000019610 I
ENSDORG00000012866 Dipodomys ordii ENSDORG00000012866 I
ENSETEG00000013115 Echinops telfairi ENSETEG00000013115 I
ENSFALG00000009781 Ficedula albicollis ENSFALG00000009781 I
ENSFALG00000014990 Ficedula albicollis ENSFALG00000014990 I
ENSFALG00000015081 Ficedula albicollis ENSFALG00000015081 I
ENSGALG00000004274 Gallus gallus ENSGALG00000004274 I
ENSGALG00000006321 Gallus gallus ENSGALG00000006321 I
ENSGALG00000026059 Gallus gallus ENSGALG00000026059 I
ENSGGOG00000026506 Gorilla gorilla ENSGGOG00000026506 I
ENSGMOG00000002790 Gadus morhua ENSGMOG00000002790 I
ENSGMOG00000003155 Gadus morhua ENSGMOG00000003155 I
ENSLACG00000012096 Latimeria chalumnae ENSLACG00000012096 I
ENSLACG00000013366 Latimeria chalumnae ENSLACG00000013366 I
ENSLACG00000019113 Latimeria chalumnae ENSLACG00000019113 I
ENSLOCG00000017835 Lepisosteus oculatus ENSLOCG00000017835 I
ENSLOCG00000018198 Lepisosteus oculatus ENSLOCG00000018198 I
ENSLOCG00000018350 Lepisosteus oculatus ENSLOCG00000018350 I
ENSMEUG00000013853 Macropus eugenii ENSMEUG00000013853 I
ENSMGAG00000002218 Meleagris gallopavo ENSMGAG00000002218 I
ENSMMUP00000014629 Macaca fascicularis ENSMMUP00000014629 I
ENSMODG00000001412 Monodelphis domestica ENSMODG00000001412 I
ENSMPUG00000019429 Mustela putorius furo ENSMPUG00000019429 I
ENSNLEG00000011342 Nomascus leucogenys ENSNLEG00000011342 I
ENSNLEG00000019264 Nomascus leucogenys ENSNLEG00000019264 I
ENSOANG00000012950 Ornithorhynchus anatinus ENSOANG00000012950 I
ENSOARG00000000265 Ovis aries ENSOARG00000000265 I
ENSOARG00000009754 Ovis aries ENSOARG00000009754 I
ENSONIG00000020502 Oreochromis niloticus ENSONIG00000020502 I
ENSONIG00000020610 Oreochromis niloticus ENSONIG00000020610 I
ENSONIG00000021177 Oreochromis niloticus ENSONIG00000021177 I
ENSONIG00000021342 Oreochromis niloticus ENSONIG00000021342 I
ENSONIG00000021420 Oreochromis niloticus ENSONIG00000021420 I
ENSP00000405176-D1 Bos grunniens ENSP00000405176-D1 I
ENSPANG00000001578 Papio anubis ENSPANG00000001578 I
ENSPFOG00000019887 Poecilia formosa ENSPFOG00000019887 I
ENSPFOG00000020053 Poecilia formosa ENSPFOG00000020053 I
ENSPFOG00000020314 Poecilia formosa ENSPFOG00000020314 I
ENSPFOG00000020501 Poecilia formosa ENSPFOG00000020501 I
ENSPMAG00000003993 Petromyzon marinus ENSPMAG00000003993 I
ENSPMAG00000010126 Petromyzon marinus ENSPMAG00000010126 I
ENSPPYG00000017754 Pongo abelii ENSPPYG00000017754 I
ENSPSIG00000001961 Pelodiscus sinensis ENSPSIG00000001961 I
ENSPSIG00000012843 Pelodiscus sinensis ENSPSIG00000012843 I
ENSPTRG00000018960 Pan troglodytes ENSPTRG00000018960 I
ENSSHAG00000003328 Sarcophilus harrisii ENSSHAG00000003328 I
ENSSTOG00000004633 Ictidomys tridecemlineatus ENSSTOG00000004633 I
ENSTGUG00000003194 Taeniopygia guttata ENSTGUG00000003194 I
ENSTGUG00000003756 Taeniopygia guttata ENSTGUG00000003756 I
ENSXMAG00000019787 Xiphophorus maculatus ENSXMAG00000019787 I
ENSXMAG00000019956 Xiphophorus maculatus ENSXMAG00000019956 I
ENSXMAG00000019999 Xiphophorus maculatus ENSXMAG00000019999 I
ENSXMAG00000020062 Xiphophorus maculatus ENSXMAG00000020062 I
ENSXMAG00000020142 Xiphophorus maculatus ENSXMAG00000020142 I
estExt_gwp.C_4170045 Branchiostoma floridae estExt_gwp.C_4170045 I
fgenesh2_pm.scaffold_217000008 Branchiostoma floridae fgenesh2_pm.scaffold_217000008 I
GB40416 Apis mellifera GB40416 I
GF13559 Drosophila ananassae FBgn0090588 I
Gfo_R002785 Geospiza fortis Gfo_R002785 I
Gfo_R012065 Geospiza fortis Gfo_R012065 I
Gfo_R014393 Geospiza fortis Gfo_R014393 I
GH20971 Drosophila grimshawi FBgn0128433 I
GI21307 Drosophila mojavensis FBgn0144037 I
GK19547 Drosophila willistoni FBgn0221545 I
GL11229 Drosophila persimilis FBgn0148838 I
GM15978 Drosophila sechellia FBgn0170894 I
HDID_0001003601 Hymenolepis diminuta HDID_0001003601 I
HelroG155122 Helobdella robusta HelroG155122 I
HMEL011603 Heliconius melpomene HMEL011603 I
HmN_000912800 Hymenolepis microstoma HmN_000912800 I
HNAJ_0000179601 Hymenolepis nana HNAJ_0000179601 I
Hsal_01530--NP_001011637.1_APIME Harpegnathos saltator Hsal_01530--NP_001011637.1_APIME I
ISCW009433 Ixodes scapularis ISCW009433 I
KGM_08280 Danaus plexippus KGM_08280 I
L798_05856 Zootermopsis nevadensis L798_05856 I
LCUP006189 Lucilia cuprina LCUP006189 I
LDEC006528 Leptinotarsa decemlineata LDEC006528 I
LLOJ002131 Lutzomyia longipalpis LLOJ002131 I
LotgiG179182 Lottia gigantea LotgiG179182 I
MCOS_0000111401 Mesocestoides corti MCOS_0000111401 I
MDOA005417 Musca domestica MDOA005417 I
Myotis_brandtii_Twist1_10031742 Myotis brandtii Myotis_brandtii_Twist1_10031742 I
NEMVEDRAFT_v1g234699 Nematostella vectensis NEMVEDRAFT_v1g234699 I
nRc.2.0.1.g46228 Romanomermis culicivorax nRc.2.0.1.g46228 I
NV10141 Nasonia vitripennis NV10141 I
Ocbimv22015922m.g Octopus bimaculoides Ocbimv22015922m.g I
Ogr01719 Ophisaurus gracilis Ogr01719 I
Ogr06591 Ophisaurus gracilis Ogr06591 I
Ogr11552 Ophisaurus gracilis Ogr11552 I
Ogr11553 Ophisaurus gracilis Ogr11553 I
PHUM396880 Pediculus humanus PHUM396880 I
PPAI002101 Phlebotomus papatasi PPAI002101 I
Pvit_02271 Pogona vitticeps Pvit_02271 I
Pvit_05844 Pogona vitticeps Pvit_05844 I
RPRC000323 Rhodnius prolixus RPRC000323 I
Sakowv30001350m.g Saccoglossus kowalevskii Sakowv30001350m.g I
SINV20920 Solenopsis invicta SINV20920 I
Sjc_0042560 Schistosoma japonicum Sjc_0042560 I
Smp_203270 Schistosoma mansoni Smp_203270 I
SMU15037660 Schmidtea mediterranea SMU15037660 I
SPU_030059 Strongylocentrotus purpuratus SPU_030059 I
SSLN_0000059301 Schistocephalus solidus SSLN_0000059301 I
TASK_0000180901 Taenia asiatica TASK_0000180901 I
TC014598 Tribolium castaneum TC014598 I
tetur03g03150 Tetranychus urticae tetur03g03150 I
TMUE_s0004013100 Trichuris muris TMUE_s0004013100 I
TsM_000716700 Taenia solium TsM_000716700 I
TTRE_0000397101 Trichuris trichiura TTRE_0000397101 I
twi Drosophila melanogaster FBgn0003900 D
twi Drosophila simulans FBgn0016355 I
twi Drosophila virilis FBgn0020065 I
twi Drosophila erecta FBgn0064598 I
twi Drosophila yakuba FBgn0084444 I
twi Drosophila pseudoobscura FBgn0243556 I
twist1 Anolis carolinensis ENSACAG00000011825 I
TWIST1 Bos taurus ENSBTAG00000046922 I
TWIST1 Dasypus novemcinctus ENSDNOG00000037354 I
TWIST1 Erinaceus europaeus ENSEEUG00000015333 I
TWIST1 Homo sapiens ENSG00000122691 D
TWIST1 Gasterosteus aculeatus ENSGACG00000006420 I
TWIST1 Meleagris gallopavo ENSMGAG00000009311 I
TWIST1 Myotis lucifugus ENSMLUG00000007047 I
TWIST1 Macaca mulatta ENSMMUG00000011173 I
TWIST1 Monodelphis domestica ENSMODG00000023924 I
Twist1 Mus musculus ENSMUSG00000035799 D
TWIST1 Ornithorhynchus anatinus ENSOANG00000009614 I
TWIST1 Oryzias latipes ENSORLG00000004012 I
twist1 Oryzias latipes ENSORLG00000007251 I
TWIST1 Pteropus vampyrus ENSPVAG00000001710 I
Twist1 Rattus norvegicus ENSRNOG00000011101 I
TWIST1 Sus scrofa ENSSSCG00000015370 I
TWIST1 Taeniopygia guttata ENSTGUG00000002643 I
TWIST1 Tetraodon nigroviridis ENSTNIG00000001678 I
twist1 Takifugu rubripes ENSTRUG00000015797 I
twist1 Xenopus tropicalis XB-GENE-479802 I
twist1.L Xenopus laevis XB-GENE-6255840 I
twist1.S Xenopus laevis XB-GENE-865309 I
twist1a Danio rerio ENSDARG00000030402 I
twist1b Danio rerio ENSDARG00000076010 I
twist1b Gasterosteus aculeatus ENSGACG00000008070 I
twist1b Tetraodon nigroviridis ENSTNIG00000018440 I
TWIST2 Bos taurus ENSBTAG00000021444 I
TWIST2 Canis familiaris ENSCAFG00000012469 I
TWIST2 Callithrix jacchus ENSCJAG00000023006 I
TWIST2 Cavia porcellus ENSCPOG00000025980 I
twist2 Danio rerio ENSDARG00000078266 I
TWIST2 Dasypus novemcinctus ENSDNOG00000002434 I
Twist2 Dipodomys ordii ENSDORG00000005906 I
TWIST2 Echinops telfairi ENSETEG00000009809 I
TWIST2 Homo sapiens ENSG00000233608 I
twist2 Gasterosteus aculeatus ENSGACG00000002227 I
TWIST2 Loxodonta africana ENSLAFG00000032174 I
TWIST2 Myotis lucifugus ENSMLUG00000023316 I
TWIST2 Macaca mulatta ENSMMUG00000021909 I
Twist2 Mus musculus ENSMUSG00000007805 D
TWIST2 Oryctolagus cuniculus ENSOCUG00000004073 I
TWIST2 Otolemur garnettii ENSOGAG00000029007 I
TWIST2 Ochotona princeps ENSOPRG00000017069 I
twist2 Oryzias latipes ENSORLG00000018096 I
TWIST2 Pan troglodytes ENSPTRG00000033910 I
Twist2 Rattus norvegicus ENSRNOG00000020355 I
TWIST2 Sus scrofa ENSSSCG00000016343 I
twist2 Tetraodon nigroviridis ENSTNIG00000001562 I
twist2 Takifugu rubripes ENSTRUG00000006090 I
twist2 Xenopus tropicalis XB-GENE-5878700 I
twist3 Danio rerio ENSDARG00000019646 I
twist3 Gasterosteus aculeatus ENSGACG00000007963 I
twist3 Oryzias latipes ENSORLG00000016373 I
twist3 Tetraodon nigroviridis ENSTNIG00000000441 I
twist3 Takifugu rubripes ENSTRUG00000011374 I
twist3 Takifugu rubripes ENSTRUG00000012607 I
twist3b Gasterosteus aculeatus ENSGACG00000004773 I
YQE_04855 Dendroctonus ponderosae YQE_04855 I