Bra006851 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra006851 T191940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.811 0.722
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.811 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006851.1-P GATA 225 260

Links

Other GATA family TFs
Other Brassica rapa TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003968 Aedes aegypti AAEL003968 N 0.000
AALB008486 Anopheles albimanus AALB008486 N 0.000
AARA009005 Anopheles arabiensis AARA009005 N 0.000
AATE001469 Anopheles atroparvus AATE001469 N 0.000
ACEP19763 Atta cephalotes ACEP19763 N 0.000
ACHR004577 Anopheles christyi ACHR004577 N 0.000
ACOM027442 Anopheles coluzzii ACOM027442 N 0.000
ACYPI001312 Acyrthosiphon pisum ACYPI001312 N 0.000
ACYPI004047 Acyrthosiphon pisum ACYPI004047 N 0.000
ADAC000396 Anopheles darlingi ADAC000396 N 0.000
ADIR009502 Anopheles dirus ADIR009502 N 0.000
AEPI007981 Anopheles epiroticus AEPI007981 N 0.000
AFAF015825 Anopheles farauti AFAF015825 N 0.000
AGAP010700 Anopheles gambiae AGAP010700 N 0.000
AMAM002480 Anopheles maculatus AMAM002480 N 0.000
AMEC018533 Anopheles melas AMEC018533 N 0.000
AMEM011057 Anopheles merus AMEM011057 N 0.000
AMIN008662 Anopheles minimus AMIN008662 N 0.000
Aqu1.227716 Amphimedon queenslandica Aqu1.227716 N 0.000
AQUA002391 Anopheles quadriannulatus AQUA002391 N 0.000
BGIBMGA000930 Bombyx mori BGIBMGA000930 N 0.000
Brh_R002088 Buceros rhinoceros Brh_R002088 N 0.000
Cflo_07758--XP_396195.2_APIME Camponotus floridanus Cflo_07758--XP_396195.2_APIME N 0.000
CLEC009664 Cimex lectularius CLEC009664 N 0.000
Cmyd_10005769 Chelonia mydas Cmyd_10005769 N 0.000
CPIJ011038 Culex quinquefasciatus CPIJ011038 N 0.000
CpipJ_CPIJ011038 Culex pipiens CpipJ_CPIJ011038 N 0.000
ENSAMXG00000005709 Astyanax mexicanus ENSAMXG00000005709 N 0.000
ENSEEUG00000014927 Erinaceus europaeus ENSEEUG00000014927 N 0.000
ENSGGOG00000012841 Gorilla gorilla ENSGGOG00000012841 N 0.000
ENSTGUG00000015201 Taeniopygia guttata ENSTGUG00000015201 N 0.000
ENSTSYG00000004240 Tarsius syrichta ENSTSYG00000004240 N 0.000
ENSVPAG00000010492 Vicugna pacos ENSVPAG00000010492 N 0.000
GB49325 Apis mellifera GB49325 N 0.000
HHAL007873-PA Halyomorpha halys HHAL007873-PA N 0.000
HHAL009893-PA Halyomorpha halys HHAL009893-PA N 0.000
Hsal_10566--XP_396195.2_APIME Harpegnathos saltator Hsal_10566--XP_396195.2_APIME N 0.000
KGM_18078 Danaus plexippus KGM_18078 N 0.000
L798_15354 Zootermopsis nevadensis L798_15354 N 0.000
LLOJ000827 Lutzomyia longipalpis LLOJ000827 N 0.000
MCINX005268 Melitaea cinxia MCINX005268 N 0.000
NEMVEDRAFT_v1g226879 Nematostella vectensis NEMVEDRAFT_v1g226879 N 0.000
PPA02259 Pristionchus pacificus PPA02259 N 0.000
PPAI003395 Phlebotomus papatasi PPAI003395 N 0.000
RPRC004446 Rhodnius prolixus RPRC004446 N 0.000
SINV15598 Solenopsis invicta SINV15598 N 0.000
SMAR014171 Strigamia maritima SMAR014171 N 0.000
SMARCA1 Pteropus vampyrus ENSPVAG00000003805 N 0.000
XP_002163131.1 Hydra magnipapillata XP_002163131.1 N 0.000