CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NechaG104418
(
Fusarium solani
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
NechaG104418
T194282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.836
0.943
gtaG
M02007_2.00
Dictyostelium discoideum
NDNBAGATBN
NVATCTVNHN
PBM
Weirauch et al.(2014)
pTH5531
0.805
0.657
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NechaP104418
GATA
408
442
TNCNRIDTPEWRRGPDGARTLCNACGLHYAKLERK
Links
Other
GATA
family TFs
Other
Fusarium solani
TFs
194 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.224590
Amphimedon queenslandica
Aqu1.224590
I
HelroG116156
Helobdella robusta
HelroG116156
I
HHAL007197-PA
Halyomorpha halys
HHAL007197-PA
I
LotgiG171288
Lottia gigantea
LotgiG171288
I
XP_002155714.1
Hydra magnipapillata
XP_002155714.1
I