CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_108660
(
Schizophyllum commune
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
SCHCODRAFT_108660
T195129_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFI97109
GATA
721
756
CHSCNIRETPEWRRGPDGARTLCNACGLHYAKLMRK
Links
Other
GATA
family TFs
Other
Schizophyllum commune
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
0.000
ASIM_0001132301
Anisakis simplex
ASIM_0001132301
N
0.000
ASIS002444
Anopheles sinensis
ASIS002444
N
0.000
CC1G_07855
Coprinopsis cinerea
CC1G_07855
N
0.000
CLEC004367
Cimex lectularius
CLEC004367
N
0.000
estExt_Genewise1.C_120062
Heterobasidion annosum
estExt_Genewise1.C_120062
N
0.000
fgenesh1_pg.C_scaffold_11000089
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000089
N
0.000
GH16346
Drosophila grimshawi
FBgn0123817
N
0.000
GLOINDRAFT_9339
Rhizophagus irregularis
GLOINDRAFT_9339
N
0.000
HETIRDRAFT_460226
Heterobasidion irregulare
HETIRDRAFT_460226
N
0.000
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.000
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.000
LALA0_S01e08702g
Lachancea lanzarotensis
LALA0_S01e08702g
N
0.000
Moror_8439
Moniliophthora roreri
Moror_8439
N
0.000
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
0.000
MVLG_01553
Microbotryum violaceum
MVLG_01553
N
0.000
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.000
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.000
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.000
SAKL0C10648g
Lachancea kluyveri
SAKL0C10648g
N
0.000
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.000
SINV25043
Solenopsis invicta
SINV25043
N
0.000
sr12520
Sporisorium reilianum
sr12520
N
0.000
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.000
UM01457
Ustilago maydis
UM01457
N
0.000