CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SELMODRAFT_29502 *(Selaginella moellendorffii)* GATA
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00320 (GATA)	IPR000679	SELMODRAFT_29502	T195159_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
GATA3 M02003_2.00	Arabidopsis thaliana	NNNNGATBNN	NNVATCNNNN	PBM Weirauch et al.(2014) pTH7657	0.816	0.923
GATA4 M00727_2.00	Arabidopsis thaliana	NNNGATCNNN	NNNGATCNNN	PBM Chang et al.(2013) pTH7196	0.813	0.923
GATA4 M06891_2.00	Arabidopsis thaliana	HNNYRGATCYRRWYY	RRWYYRGATCYRNND	Dap-seq OMalley et al.(2016) GATA4_col_a	0.813	0.923
GATA7 M02004_2.00	Arabidopsis thaliana	NNNNATNNNN	NNNNATNNNN	PBM Weirauch et al.(2014) pTH7658	0.812	0.885
GATA9 M02002_2.00	Arabidopsis thaliana	NHAGATCTDNN	NNHAGATCTDN	PBM Weirauch et al.(2014) pTH7378	0.802	0.885
GATA12 M00863_2.00	Arabidopsis thaliana	NNNGATBN	NVATCNNN	PBM Franco-Zorrilla et al.(2014) GATA12	0.802	0.885
GATA12 M06895_2.00	Arabidopsis thaliana	DWWYYAGATCYRR	YYRGATCTRRWWH	Dap-seq OMalley et al.(2016) GATA12_col_a	0.802	0.885
GATA12 M06896_2.00	Arabidopsis thaliana	YRGATCTRRWYYNDN	NHNRRWYYAGATCYR	Dap-seq OMalley et al.(2016) GATA12_colamp_a	0.802	0.885
For this family, TFs with SR scores > 0.802* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EFJ34037	GATA	1	26	QWRTGPLGPKTLCNACGVRFKSGRLF

Links
Other GATA family TFs
Other *Selaginella moellendorffii* TFs