Pavir.J25423 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J25423 T028615_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J25423.1.p BED ZF 25 84

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g014876 Sorghum bicolor Sb07g014876 N 0.833
Sb01g027440 Sorghum bicolor Sb01g027440 N 0.810
Sb04g017410 Sorghum bicolor Sb04g017410 N 0.810
GRMZM2G362557 Zea mays GRMZM2G362557 N 0.786
Pavir.J08193 Panicum virgatum Pavir.J08193 N 0.786
Sb01g047190 Sorghum bicolor Sb01g047190 N 0.762
Sb02g011140 Sorghum bicolor Sb02g011140 N 0.762
Sb05g007535 Sorghum bicolor Sb05g007535 N 0.762
Sb10g011520 Sorghum bicolor Sb10g011520 N 0.762
Pavir.Cb01025 Panicum virgatum Pavir.Cb01025 N 0.762
Pavir.Hb01043 Panicum virgatum Pavir.Hb01043 N 0.762
Pavir.Ia02323 Panicum virgatum Pavir.Ia02323 N 0.758
Sb04g008820 Sorghum bicolor Sb04g008820 N 0.738
Sb05g004780 Sorghum bicolor Sb05g004780 N 0.738
Pavir.J10621 Panicum virgatum Pavir.J10621 N 0.738
GRMZM2G454472 Zea mays GRMZM2G454472 N 0.714
Sb01g024553 Sorghum bicolor Sb01g024553 N 0.714
Pavir.Ab01384 Panicum virgatum Pavir.Ab01384 N 0.714
Pavir.Ba00900 Panicum virgatum Pavir.Ba00900 N 0.714
Pavir.Ba02755 Panicum virgatum Pavir.Ba02755 N 0.714
Pavir.Hb01581 Panicum virgatum Pavir.Hb01581 N 0.714