CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb05g004780
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb05g004780
T027601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g004780.1
BED ZF
133
181
DVGWEYGVLVDANNKDKVKCKLCNKEMRGGIHRLKQHLAHEGKNVKKCA
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb01g024553
Sorghum bicolor
Sb01g024553
N
0.952
Sb05g007535
Sorghum bicolor
Sb05g007535
N
0.952
Pavir.Ba00900
Panicum virgatum
Pavir.Ba00900
N
0.905
GRMZM2G362557
Zea mays
GRMZM2G362557
N
0.881
Pavir.Ab01384
Panicum virgatum
Pavir.Ab01384
N
0.881
Pavir.Ib02562
Panicum virgatum
Pavir.Ib02562
N
0.881
Sb04g008820
Sorghum bicolor
Sb04g008820
N
0.857
Pavir.Hb01043
Panicum virgatum
Pavir.Hb01043
N
0.857
Pavir.J15543
Panicum virgatum
Pavir.J15543
N
0.857
Sb04g017410
Sorghum bicolor
Sb04g017410
N
0.833
Sb01g047190
Sorghum bicolor
Sb01g047190
N
0.810
Sb02g011140
Sorghum bicolor
Sb02g011140
N
0.810
Sb02g013136
Sorghum bicolor
Sb02g013136
N
0.810
Sb07g014876
Sorghum bicolor
Sb07g014876
N
0.810
Sb10g011520
Sorghum bicolor
Sb10g011520
N
0.810
Pavir.Hb01581
Panicum virgatum
Pavir.Hb01581
N
0.810
Sb01g013490
Sorghum bicolor
Sb01g013490
N
0.795
Sb08g005616
Sorghum bicolor
Sb08g005616
N
0.795
GRMZM2G454472
Zea mays
GRMZM2G454472
N
0.786
Sb01g027440
Sorghum bicolor
Sb01g027440
N
0.786
Pavir.J08193
Panicum virgatum
Pavir.J08193
N
0.762
Pavir.J25423
Panicum virgatum
Pavir.J25423
N
0.738
Pavir.Ba02755
Panicum virgatum
Pavir.Ba02755
N
0.714
Pavir.Cb01025
Panicum virgatum
Pavir.Cb01025
N
0.714
Pavir.J10621
Panicum virgatum
Pavir.J10621
N
0.714