Solyc05g054400.2 (Solanum lycopersicum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Solyc05g054400.2 T195303_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.861
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.861
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.861
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g054400.2.1 GATA 32 67

Links

Other GATA family TFs
Other Solanum lycopersicum TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009222 Calypte anna Aan_R009222 I
Aan_R012662 Calypte anna Aan_R012662 I
Afo_R010468 Aptenodytes forsteri Afo_R010468 I
Afo_R011419 Aptenodytes forsteri Afo_R011419 I
Afo_R014746 Aptenodytes forsteri Afo_R014746 I
Alligator_sinensis_CCG008430.1 Alligator sinensis Alligator_sinensis_CCG008430.1 I
Alligator_sinensis_CCG015622.1 Alligator sinensis Alligator_sinensis_CCG015622.1 I
Brh_R000433 Buceros rhinoceros Brh_R000433 I
Brh_R009589 Buceros rhinoceros Brh_R009589 I
Cmyd_10011521 Chelonia mydas Cmyd_10011521 I
Cmyd_10021085 Chelonia mydas Cmyd_10021085 I
ENSAMEG00000005976 Ailuropoda melanoleuca ENSAMEG00000005976 I
ENSAMEG00000018268 Ailuropoda melanoleuca ENSAMEG00000018268 I
ENSAMXG00000003452 Astyanax mexicanus ENSAMXG00000003452 I
ENSAMXG00000006093 Astyanax mexicanus ENSAMXG00000006093 I
ENSAMXG00000012775 Astyanax mexicanus ENSAMXG00000012775 I
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I
ENSAPLG00000014646 Anas platyrhynchos ENSAPLG00000014646 I
ENSCPOG00000027266 Cavia porcellus ENSCPOG00000027266 I
ENSCSAG00000003142 Chlorocebus sabaeus ENSCSAG00000003142 I
ENSCSAG00000007164 Chlorocebus sabaeus ENSCSAG00000007164 I
ENSFALG00000005506 Ficedula albicollis ENSFALG00000005506 I
ENSFALG00000006647 Ficedula albicollis ENSFALG00000006647 I
ENSFALG00000013071 Ficedula albicollis ENSFALG00000013071 I
ENSGALG00000006448 Gallus gallus ENSGALG00000006448 I
ENSGALG00000012830 Gallus gallus ENSGALG00000012830 I
ENSGMOG00000003945 Gadus morhua ENSGMOG00000003945 I
ENSGMOG00000005047 Gadus morhua ENSGMOG00000005047 I
ENSGMOG00000016994 Gadus morhua ENSGMOG00000016994 I
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I
ENSLACG00000005859 Latimeria chalumnae ENSLACG00000005859 I
ENSLACG00000007228 Latimeria chalumnae ENSLACG00000007228 I
ENSLOCG00000001013 Lepisosteus oculatus ENSLOCG00000001013 I
ENSLOCG00000003532 Lepisosteus oculatus ENSLOCG00000003532 I
ENSLOCG00000013008 Lepisosteus oculatus ENSLOCG00000013008 I
ENSMEUG00000002440 Macropus eugenii ENSMEUG00000002440 I
ENSMPUG00000007848 Mustela putorius furo ENSMPUG00000007848 I
ENSMPUG00000008641 Mustela putorius furo ENSMPUG00000008641 I
ENSNLEG00000010631 Nomascus leucogenys ENSNLEG00000010631 I
ENSNLEG00000011429 Nomascus leucogenys ENSNLEG00000011429 I
ENSOARG00000003822 Ovis aries ENSOARG00000003822 I
ENSOARG00000011513 Ovis aries ENSOARG00000011513 I
ENSONIG00000005631 Oreochromis niloticus ENSONIG00000005631 I
ENSONIG00000006398 Oreochromis niloticus ENSONIG00000006398 I
ENSONIG00000009637 Oreochromis niloticus ENSONIG00000009637 I
ENSONIG00000017148 Oreochromis niloticus ENSONIG00000017148 I
ENSP00000268638 Macaca fascicularis ENSP00000268638 I
ENSP00000268638-D1 Bos grunniens ENSP00000268638-D1 I
ENSP00000370343 Macaca fascicularis ENSP00000370343 I
ENSP00000370343-D1 Bos grunniens ENSP00000370343-D1 I
ENSPANG00000024770 Papio anubis ENSPANG00000024770 I
ENSPFOG00000000657 Poecilia formosa ENSPFOG00000000657 I
ENSPFOG00000009490 Poecilia formosa ENSPFOG00000009490 N
ENSPFOG00000015506 Poecilia formosa ENSPFOG00000015506 I
ENSPFOG00000017639 Poecilia formosa ENSPFOG00000017639 I
ENSPPYG00000007620 Pongo abelii ENSPPYG00000007620 I
ENSPPYG00000016161 Pongo abelii ENSPPYG00000016161 I
ENSPSIG00000003518 Pelodiscus sinensis ENSPSIG00000003518 I
ENSPSIG00000011619 Pelodiscus sinensis ENSPSIG00000011619 I
ENSPSIG00000011788 Pelodiscus sinensis ENSPSIG00000011788 I
ENSSHAG00000006901 Sarcophilus harrisii ENSSHAG00000006901 I
ENSSHAG00000015592 Sarcophilus harrisii ENSSHAG00000015592 I
ENSSSCG00000023184 Sus scrofa ENSSSCG00000023184 I
ENSSTOG00000011470 Ictidomys tridecemlineatus ENSSTOG00000011470 I
ENSSTOG00000028363 Ictidomys tridecemlineatus ENSSTOG00000028363 I
ENSTGUG00000006609 Taeniopygia guttata ENSTGUG00000006609 I
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I
ENSXMAG00000006246 Xiphophorus maculatus ENSXMAG00000006246 I
ENSXMAG00000017015 Xiphophorus maculatus ENSXMAG00000017015 I
ENSXMAG00000017848 Xiphophorus maculatus ENSXMAG00000017848 N
Gfo_R000501 Geospiza fortis Gfo_R000501 I
Gfo_R003357 Geospiza fortis Gfo_R003357 I
irf10 Danio rerio ENSDARG00000027658 I
irf10 Gasterosteus aculeatus ENSGACG00000015123 I
irf10 Oryzias latipes ENSORLG00000011745 N
irf10 Tetraodon nigroviridis ENSTNIG00000012613 I
irf10 Takifugu rubripes ENSTRUG00000002917 I
IRF4 Anolis carolinensis ENSACAG00000017711 I
IRF4 Bos taurus ENSBTAG00000002929 I
IRF4 Callithrix jacchus ENSCJAG00000019524 I
IRF4 Cavia porcellus ENSCPOG00000003562 I
Irf4 Dipodomys ordii ENSDORG00000014895 I
IRF4 Equus caballus ENSECAG00000016808 I
IRF4 Echinops telfairi ENSETEG00000018472 I
IRF4 Felis catus ENSFCAG00000022941 I
IRF4 Homo sapiens ENSG00000137265 D
IRF4 Gorilla gorilla ENSGGOG00000012342 I
IRF4 Loxodonta africana ENSLAFG00000017235 I
IRF4 Myotis lucifugus ENSMLUG00000010058 I
IRF4 Macaca mulatta ENSMMUG00000018513 I
IRF4 Monodelphis domestica ENSMODG00000008383 I
Irf4 Mus musculus ENSMUSG00000021356 D
IRF4 Ornithorhynchus anatinus ENSOANG00000006326 I
IRF4 Oryctolagus cuniculus ENSOCUG00000009374 I
IRF4 Otolemur garnettii ENSOGAG00000014574 I
IRF4 Ochotona princeps ENSOPRG00000012683 I
IRF4 Pan troglodytes ENSPTRG00000017656 I
IRF4 Pteropus vampyrus ENSPVAG00000005078 I
Irf4 Rattus norvegicus ENSRNOG00000061070 I
IRF4 Tupaia belangeri ENSTBEG00000012240 I
IRF4 Taeniopygia guttata ENSTGUG00000002144 I
IRF4 Tursiops truncatus ENSTTRG00000001849 I
irf4 Xenopus tropicalis XB-GENE-988321 I
irf4a Danio rerio ENSDARG00000006560 I
irf4a Gasterosteus aculeatus ENSGACG00000016461 I
irf4a Oryzias latipes ENSORLG00000017242 I
irf4a Tetraodon nigroviridis ENSTNIG00000005370 I
irf4a Takifugu rubripes ENSTRUG00000011568 I
irf4b Danio rerio ENSDARG00000055374 I
irf4b Gasterosteus aculeatus ENSGACG00000004966 I
irf4b Oryzias latipes ENSORLG00000012712 I
irf4b Tetraodon nigroviridis ENSTNIG00000008222 I
irf4b Takifugu rubripes ENSTRUG00000002946 I
IRF8 Anolis carolinensis ENSACAG00000005409 I
IRF8 Bos taurus ENSBTAG00000017824 I
IRF8 Canis familiaris ENSCAFG00000019919 I
IRF8 Callithrix jacchus ENSCJAG00000017331 I
irf8 Danio rerio ENSDARG00000056407 I
IRF8 Dasypus novemcinctus ENSDNOG00000038898 I
IRF8 Erinaceus europaeus ENSEEUG00000002644 I
IRF8 Felis catus ENSFCAG00000007615 I
IRF8 Homo sapiens ENSG00000140968 D
irf8 Gasterosteus aculeatus ENSGACG00000015958 I
IRF8 Gallus gallus ENSGALG00000005757 I
IRF8 Gorilla gorilla ENSGGOG00000028251 I
IRF8 Loxodonta africana ENSLAFG00000010973 I
IRF8 Myotis lucifugus ENSMLUG00000005109 I
IRF8 Macaca mulatta ENSMMUG00000008125 I
IRF8 Monodelphis domestica ENSMODG00000004572 I
Irf8 Mus musculus ENSMUSG00000041515 D
IRF8 Ornithorhynchus anatinus ENSOANG00000003741 I
IRF8 Oryctolagus cuniculus ENSOCUG00000000536 I
IRF8 Otolemur garnettii ENSOGAG00000009262 I
IRF8 Ochotona princeps ENSOPRG00000002139 I
irf8 Oryzias latipes ENSORLG00000018216 I
IRF8 Procavia capensis ENSPCAG00000004460 I
IRF8 Pan troglodytes ENSPTRG00000008435 I
IRF8 Pteropus vampyrus ENSPVAG00000003758 I
Irf8 Rattus norvegicus ENSRNOG00000017869 I
IRF8 Tupaia belangeri ENSTBEG00000013828 I
irf8 Tetraodon nigroviridis ENSTNIG00000009283 I
irf8 Takifugu rubripes ENSTRUG00000018213 I
irf8.L Xenopus laevis XB-GENE-985949 I
irf9 Danio rerio ENSDARG00000016457 I
irf9 Gasterosteus aculeatus ENSGACG00000001697 I
Myotis_brandtii_Irf4_10020370 Myotis brandtii Myotis_brandtii_Irf4_10020370 I
Myotis_brandtii_IRF8_10035313 Myotis brandtii Myotis_brandtii_IRF8_10035313 I
Ogr05775 Ophisaurus gracilis Ogr05775 I
Ogr08841 Ophisaurus gracilis Ogr08841 I
Pvit_05673 Pogona vitticeps Pvit_05673 I
Pvit_16863 Pogona vitticeps Pvit_16863 I
Tal_R007108 Tyto alba Tal_R007108 I
Tal_R010571 Tyto alba Tal_R010571 I