CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Z518_02954
(
Rhinocladiella mackenziei
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
Z518_02954
T195765_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sre
M01237_2.00
Neurospora crassa
NHGATHWN
NWDATCDN
PBM
Lambert et al.(2019)
pTH11832
0.806
0.771
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIX08298
GATA
101
135
CSNCNTTKTPLWRRSPTGTTICNACGLYQKTRNHP
KIX08298
GATA
266
300
CKNCGTTVTPLWRRDEQGHPICNACGLYHKLHGSL
Links
Other
GATA
family TFs
Other
Rhinocladiella mackenziei
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0380s0018
Capsella grandiflora
Cagra.0380s0018
I
Carubv10006208m.g
Capsella rubella
Carubv10006208m.g
I
POPTR_0006s08000
Populus trichocarpa
POPTR_0006s08000
N
Thhalv10026328m.g
Eutrema salsugineum
Thhalv10026328m.g
I