CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10028671m.g
(
Citrus clementina
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Ciclev10028671m.g
T196496_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10028671m
GATA
207
244
CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTL
Ciclev10028736m
GATA
207
244
CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTL
Ciclev10028987m
GATA
207
244
CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTL
Ciclev10029075m
GATA
207
244
CQHCGISEKLTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Citrus clementina
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000203201
Angiostrongylus costaricensis
ACOC_0000203201
N
ANCCEY_05608
Ancylostoma ceylanicum
ANCCEY_05608
N
ANCDUO_02759
Ancylostoma duodenale
ANCDUO_02759
N
HCOI00669800
Haemonchus contortus
HCOI00669800
N
HCOI01493400
Haemonchus contortus
HCOI01493400
N
NBR_0000283601
Nippostrongylus brasiliensis
NBR_0000283601
N
TELCIR_06445
Teladorsagia circumcincta
TELCIR_06445
N