CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01493400
(
Haemonchus contortus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
HCOI01493400
T016558_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01493400.t1
ARID/BRIGHT
84
166
ERQVFLEKITTFWRLQGFEFKNLVIDGKNVDLFKLYKVVKSLGGASTVTSKKQWTQASRKVNVRSNHGTSNLKAYYLKFMQPF
HCOI01493400.t2
ARID/BRIGHT
84
166
ERQVFLEKITTFWRLQGFEFKNLVIDGKNVDLFKLYKVVKSLGGASTVTSKKQWTQASRKVNVRSNHGTSNLKAYYLKFMQPF
HCOI01493400.t3
ARID/BRIGHT
84
166
ERQVFLEKITTFWRLQGFEFKNLVIDGKNVDLFKLYKVVKSLGGASTVTSKKQWTQASRKVNVRSNHGTSNLKAYYLKFMQPF
HCOI01493400.t4
ARID/BRIGHT
84
144
ERQVFLEKITTFWRLQGFEFKNLVIDGKNVDLFKLYKVVKSLGGASTVTSKKQWTQASRKV
HCOI01493400.t4
ARID/BRIGHT
141
189
SRKVVKSLGGASTVTSKKQWTQASRKVNVRSNHGTSNLKAYYLKFMQPF
Links
Other
ARID/BRIGHT
family TFs
Other
Haemonchus contortus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00669800
Haemonchus contortus
HCOI00669800
N
0.785
TELCIR_06445
Teladorsagia circumcincta
TELCIR_06445
N
0.748
ANCCEY_05608
Ancylostoma ceylanicum
ANCCEY_05608
N
0.540
ANCDUO_02759
Ancylostoma duodenale
ANCDUO_02759
N
0.511
DICVIV_03696
Dictyocaulus viviparus
DICVIV_03696
N
0.479
NBR_0000283601
Nippostrongylus brasiliensis
NBR_0000283601
N
0.451
NBR_0000384001
Nippostrongylus brasiliensis
NBR_0000384001
N
0.451
VDBG_03434
Verticillium albo atrum
VDBG_03434
N
0.434
VDAG_09953
Verticillium dahliae
VDAG_09953
N
0.434
VDBG_03434
Verticillium alfalfae
VDBG_03434
N
0.434